Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1258 ATGAAGCTAAACCTGCAACAAAATCACTTATTCTTCACCTTCTTGTGGAGCTTCATAATATGGTCATGGTGGACTGTAGACGGAGTCGTTTCAGACCCACAGCTGACTCGTGTGAAATTAGGTTGTAGCAGCTATAACGTCAGCGACGTGACCATCTTCAATGAGAACCTAAACGCAACGATGCGAAGCCTGAGAGAGCAGGTCAGCAACCAAAGCAAGCACTTTGCGACGGCGATGGGGGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGGAACTACCTTTCCATCAAAGACTGCCTCGCTTGCTTCGACTTCGCTCGTGTTCGTATTTATGACAACTGTTCCATCGCCGCCACCGGTGCCCGGGTTGTTTACGAAGGTTGCTTCCTCAGGTATGAGAGCGGCTTTTTCTTCGACCAGTCCATAGACGCTGGGAACCACATTATGTGTGGGAATGGTAGTGTGGCTAAAAACTCCACTGAACTTGCTTCAACTGTGCAACAAGTGCTACAGAATCTGGTAGAAGCAACACCAAGAATACCTGGCTTCTTTGCAGCCACTATAACGTCAGTTCCTAACAGTAATGCCTCGAATATTAATGCCATTGCTCAATGTCTCGAGACGGTCACTCAAAGTGGCTGCCAGGATTGCTTGGAGTCTGGGTTAAGAAATTTTCAGATTTGTATTCCCAACCCGAATGCTCAAATTTTTTATGCTGGTTGCTACATGAGATATTCCACCTCCGCATTTTTTGCTCAAAATCAGATCACTGATATCAAAGACATCTTGAGACAAGGAGATTCAAGCAAGAAGAAGGCCATTATTGGAGGAGTAGTCGGAGGTGCATCTTTTATTTTGATTCTCCTTGCATTGCTTGCTTTGTATAGACGATCACTGTCCAAGAGGGTTCATAGAGCTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCAGTAAACTATAGGTATAATGATCTGAAGTCTGCAACCAAAAATTTCAGTAAAGAGAATAAATTAGGAGAAGGAGGTTTTGGGGATGTATACAAGGGTACTCTGAAAAATGGAGAAGTAATTGCTATAAAGAAATTGGCTTTAGAGCAATCCAAAAAGATGGAGGAAGATTTTGAAAGTGAAGTCAAGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGTTGTTGCAGCAAAGGTCGAGAGAGATTTCTCGTCTATGAGTACATGAAGAACAATAATGTTGGCCAATTCTTATTTGGTGAAAATAAAGGTTCTCTCAATTGGAAGCAACGTCATGGCATAATTTTAGGCACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTTCACATTTGCATCATACATAGAGATATAAAGCCTAGTAACATCCTCTTAGATGATGACTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAGAGGGCCAATCTCATCTCAATACAGGATTTGCGGGAACAATGGGATACACAGCACCTGAGTATGTAATGCATGGACAATTATCAGAGAAGGTTGATATCTATTGCTATGGAGTTGTAATCTTAGAAATTATAAGTGGGCAAAAGAGTGGTGAACTAAAGGATGATGATGGAGGCGAATTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGGAATGCACATAGAGTTTGTGGACAAAACCTTAGATCCAAATGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGATTGCTTTTAACGCAATCATCTCCTGCAGCAAGGCCAACAATGTTTGAAGTTGTCGATATGCTCGAGAGCAAGGGTGGCTTAACAGATCAAAAGCGACCCACTATGCCTGTCTATGTTGATCCTAATTTGAGGCCTCGAAAAGATGGTCAGTCTAATAGCTCATCTTTATCAAATGCTCATCTCTCCACTTCTATTCCATCAGGAAGGTGA 1965 0.4244 MKLNLQQNHLFFTFLWSFIIWSWWTVDGVVSDPQLTRVKLGCSSYNVSDVTIFNENLNATMRSLREQVSNQSKHFATAMGVKGNNPAYGVFQCRNYLSIKDCLACFDFARVRIYDNCSIAATGARVVYEGCFLRYESGFFFDQSIDAGNHIMCGNGSVAKNSTELASTVQQVLQNLVEATPRIPGFFAATITSVPNSNASNINAIAQCLETVTQSGCQDCLESGLRNFQICIPNPNAQIFYAGCYMRYSTSAFFAQNQITDIKDILRQGDSSKKKAIIGGVVGGASFILILLALLALYRRSLSKRVHRADILGATELKGPVNYRYNDLKSATKNFSKENKLGEGGFGDVYKGTLKNGEVIAIKKLALEQSKKMEEDFESEVKLISNVHHRNLVRLLGCCSKGRERFLVYEYMKNNNVGQFLFGENKGSLNWKQRHGIILGTARGLAYLHEGFHICIIHRDIKPSNILLDDDFQPKIADFGLARLLPEGQSHLNTGFAGTMGYTAPEYVMHGQLSEKVDIYCYGVVILEIISGQKSGELKDDDGGEFLLQRAWKLYDRGMHIEFVDKTLDPNEYDAEEVKKIIEIGLLLTQSSPAARPTMFEVVDMLESKGGLTDQKRPTMPVYVDPNLRPRKDGQSNSSSLSNAHLSTSIPSGR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1258 654 MobiDBLite consensus disorder prediction 611 654 - -
Acco05g1258 654 CDD STKc_IRAK 341 607 - -
Acco05g1258 654 FunFam Cysteine-rich receptor-like protein kinase 2 302 411 - -
Acco05g1258 654 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Acco05g1258 654 MobiDBLite consensus disorder prediction 631 654 - -
Acco05g1258 654 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Acco05g1258 654 Pfam Protein kinase domain 335 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1258 654 ProSiteProfiles Protein kinase domain profile. 335 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1258 654 FunFam Cysteine-rich receptor-like protein kinase 2 412 614 - -
Acco05g1258 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 630 - -
Acco05g1258 654 Coils Coil 54 74 - -
Acco05g1258 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Acco05g1258 654 Pfam Salt stress response/antifungal 45 137 IPR002902 -
Acco05g1258 654 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Acco05g1258 654 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Acco05g1258 654 SMART serkin_6 335 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1258 654 Gene3D Transferase(Phosphotransferase) domain 1 412 620 - -
Acco05g1258 654 Gene3D - 36 140 IPR038408 -
Acco05g1258 654 Gene3D - 148 253 IPR038408 -
Acco05g1258 654 SUPERFAMILY Protein kinase-like (PK-like) 319 607 IPR011009 -
Acco05g1258 654 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1258 Acco-ChrAcco05 25933877 25938640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1258 9 648 Receptor kinase-like Gene Family AT1G70520 35.213 1.81e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1258 Pkinase 3e-50 CL0016