Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1257 ATGCTTCAACGTCGTCCTCATGTCCTTCCTTTGTTAATCACCTTCATATTCTGCTCATGCTGCAGCATCCTCAACGGCGTCGTTTCAGAGCCACAGACCAATCTTCTGAAGAGTGAGTGCAATCCAACCTTCGTGTACCTCGTGTCCAACTTCTCCATCTTCGACGAAAATCTAAAGGCAACGTTGAGACACATCAGAGAGCAGATCAGTGAACAAAAGAAACACTTTGCCACCGCACAGCAAGGAAATGGAGAAAACCCCGTCTCCACTCTATTCCAATGCAGAAACTACCTCTCCCTCGTCGACTGTCTTGCGTGCTTCGACGTTGCCGCCGCGCGAATCCTAAGCTGCACTGTGGGGTCCTCCGGTGCTCATGTTGTCTACGACGGCTGCTTCCTCAGGTACGACATTAGTAGTTCTTTCCTTGAAGAAACAACACAAACTTTCAACACCGCAGATTGTGGTAATCAAACTGAAGGTGGAGACACAAAAACGTTCACATCTGTTGAACAACAAGTGTTGATGAATCTTCAAACAGCAACACCTAGGATCAAAGGTTTTTTTGCAGCAGCCATGAAGATGACAGTGTCAAATAGCAATAATAGTAATGGTCCAACTATTATTTATGCCTTTGCCCAATGCATTGAAACTATTTCACAAAATGATTGCCTCAGTTGCTTGAATGCTGGATACAACAATATGCAGACATGTCTTTCCTATTCTAATAATGGAAGGGCTTTTGCTAATGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAATTATCAGACAATTGATATTATACCCACCTTCAAAAAAGGTTCGAGTCATAGGGGGGTCATTATTGCTGGAGTTGTTTCTGGTGTAGCTCTTGCTTTGATCCTTGTTGCATTATTTGCTTTTATTAGACGACCTAAAAACCTTGAAGGGGTTCCTAGAGGAGACATGCCTGGAGCAAGCAAGTTGAAAGGCCCAGTTACTTATAGTTATAAGGATTTGAAGTCTGCTACCAAGAATTTTAGTGAAGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGAAGAATGGGAAAGTAGTTGCAGTTAAGAAATTAGCTTTACGCCACTCCAATAGGATCAATGAAGAATTTGAGAGTGAAGTGAAGCTGATAAGTAATGTTCATCACCGGAATCTTGTTCGACTTTTGGGATGTTGTAATGCAGGCAACAACAAAATCCTTGTTTATGAATACATGAAAAACAGAAGCCTTGACGGATTCTTATTTGGAGGTGAAAAGAAAGGTTTTCTTAACTGGAAGCAACGATATGAAGTGATTTTAGGAACAGCAAGAGGATTGACTTATCTTCATGAGGAATTTCATGTTCGCATTATTCATAGAGATATAAAGACAAATAATATCCTTTTGGATGATGATCTACAACCAAGAATCGCAGATTTTGGGTTGGCAAGACGTATACCCGAGAACCAAACTCATCTTAGTACAAAATTCGCTGGAACATTAGGATATACAGCACCAGAATATGCAATCTATGGCCAATTATCAGAAAAGACTGATATTTATAGCTATGGTGTTGTACTCTTAGAAATCATTAGTGGTCAAAGAAGCAATGAATTGAAGGTCCATGGTGACGCTGAAGGCGAATTCCTCCTACAAAAAGCTTGGAAATTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAATGCCTTAGACCCTAATGATTATGATGCAGGTGAAGTGAAGAAAATTATAGAAATTGGTTTGCTTTGCATACAAGCATCTGCTGAATTAAGGCCACCAATGTCTGAAATAATGGTTTTGCTTCAGAAGAAGGATTTGTTAGAGAATATGAGGCCAACTATGCCTATCTTCATTGAAAGTAATTAG 1914 0.4023 MLQRRPHVLPLLITFIFCSCCSILNGVVSEPQTNLLKSECNPTFVYLVSNFSIFDENLKATLRHIREQISEQKKHFATAQQGNGENPVSTLFQCRNYLSLVDCLACFDVAAARILSCTVGSSGAHVVYDGCFLRYDISSSFLEETTQTFNTADCGNQTEGGDTKTFTSVEQQVLMNLQTATPRIKGFFAAAMKMTVSNSNNSNGPTIIYAFAQCIETISQNDCLSCLNAGYNNMQTCLSYSNNGRAFANGCFMRYSTTSFFPDNYQTIDIIPTFKKGSSHRGVIIAGVVSGVALALILVALFAFIRRPKNLEGVPRGDMPGASKLKGPVTYSYKDLKSATKNFSEENKIGEGGFGVVYKGILKNGKVVAVKKLALRHSNRINEEFESEVKLISNVHHRNLVRLLGCCNAGNNKILVYEYMKNRSLDGFLFGGEKKGFLNWKQRYEVILGTARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARRIPENQTHLSTKFAGTLGYTAPEYAIYGQLSEKTDIYSYGVVLLEIISGQRSNELKVHGDAEGEFLLQKAWKLYERGMHLELVDNALDPNDYDAGEVKKIIEIGLLCIQASAELRPPMSEIMVLLQKKDLLENMRPTMPIFIESN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1257 637 Pfam Protein kinase domain 344 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1257 637 FunFam Cysteine-rich receptor-like protein kinase 2 420 625 - -
Acco05g1257 637 CDD STKc_IRAK 349 619 - -
Acco05g1257 637 FunFam Cysteine-rich receptor-like protein kinase 2 314 419 - -
Acco05g1257 637 Gene3D Phosphorylase Kinase; domain 1 320 419 - -
Acco05g1257 637 Gene3D - 32 139 IPR038408 -
Acco05g1257 637 Gene3D - 146 260 IPR038408 -
Acco05g1257 637 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 635 - -
Acco05g1257 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Acco05g1257 637 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Acco05g1257 637 CDD TM_EGFR-like 278 311 - -
Acco05g1257 637 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Acco05g1257 637 SMART serkin_6 343 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1257 637 Pfam Salt stress response/antifungal 50 136 IPR002902 -
Acco05g1257 637 Pfam Salt stress response/antifungal 154 257 IPR002902 -
Acco05g1257 637 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Acco05g1257 637 SUPERFAMILY Protein kinase-like (PK-like) 327 623 IPR011009 -
Acco05g1257 637 ProSiteProfiles Protein kinase domain profile. 343 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1257 637 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Acco05g1257 637 ProSiteProfiles Gnk2-homologous domain profile. 148 260 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1257 Acco-ChrAcco05 25852093 25857911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1257 2 635 Receptor kinase-like Gene Family AT1G70520 36.589 9.19e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1257 Pkinase 2.5e-48 CL0016