Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1253 ATGCAACAAAAACCTTTCATCTTCTTATTGTTGAGCTTCATAATATGGTCATGGTGGACTCTGAACGGCGTCGTTTCAGACCCACAGACCAACTTTGTGAAGATAGGGTGCAGCCAATACAACGTCACAGACGTGAGCATCTTCCATCGGAACCTAAACGCAACGTTTCGAGACCTGAAATCTCAGGTCGGTAACCAAAGCAAACACTTCGCGACGGCGCAGGCGGTGAACGGTAACAACCCAGCTTATGGCATCTTTCAGTGCAGAAACTATCTCTCCATCTCCGACTGTCTCAAGTGCTTCGATTTCGCCGCCGATCACATCCGTAACTGCTCCGTCGGCGCCACCGGTGCTCGCATCATCTATGAAGGCTGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCTGGCAACAACATTGTGTGTGGGGATAAAGCAAAAAACTCCACTGAACTTGCTTCTACAGTGGAACAAGTGCTAACAAATCTGGGAACAGCAACACCGAGAATACCTGGTTACTATGCAGCCACTAAAACACCAGTGCCTAACACTAATGGCTCAAGCATTTATGCCTTTGCTCAATGTCTTGAGACTCTCACTCAAAGTGGCTGCCAGGATTGCTTGAATACTGGCTTAAAAAATTTCCAGATATGTCTTCCCAACTCAAATGCTAAGACTTATGATGCAGGTTGTTTCATAAGATACTCCACCACTGCTTTCTTTGCTGATAACCAAACCACTAATATAAAGCACTTCTTGAAACAAGGAGGTTCAAGCAAGAAGAAGGCCATTATTGGTGGAGTTGTTGGGGGTGTATCTTTCATTCTGATTCTCCTAGCATTATTTGCTTTGTACATACGGTCAACGGCATCCAAAAGGAATCCTAGAGGTGACATTTTGGGAGCAACTGAATTGAAAGGCCCTGTTAACTATAGATATAAAGATCTAAAGACTGCAACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGTGATGTGTACAAGGGCACCCTAAAAAATGGAAAGGTAGTTGCTGTCAAGAAATTAGCTCTGGGCCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTCCATCATCGAAATCTTGTTCGACTTCTGGGATGCTGTAGTAAAGGCCAAGAGAGATTTCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTGAAAATAAAGGTTCCCTCAGTTGGAAGCAACGCTACAATATAATTTTGGGCACAGCAAGGGGTTTAGCCTATCTACATGAGGAATTCCATGTTTGTATTATTCACAGAGATATAAAAACTAGCAATATCCTCATGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCAAAGGACCAATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGTTGATACTTATAGCTATGGTGTTGTGCTTCTAGAAATCATAAGTGGACAAAAGAGTGGTGAATTAAAGATTGATGAATCAAGCGAACTCCTCCTTCAAAGGGCTTGGAAACTGTACGACAGAGGAATGCACATGGAGTTTGTGGACAAAACCTTAGATCCAAATGAGTATGATGCGGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACCCAAGCATCCCCTGCTGCAAGGCCAACAATGTCTGAAATTGTCGTTATGCTCAAAAGCAAGGGATTAATGGAGAACAAGAAACCCACCATGCCTGTCTATGTTGATCCTAATTTCAGGCCTAGAACAAATGGTTCTACGCCTAATGGTACATCTTATTCACATGCTACCATTTCCATTTCGAGTATATCAGGAAGATGA 1944 0.4203 MQQKPFIFLLLSFIIWSWWTLNGVVSDPQTNFVKIGCSQYNVTDVSIFHRNLNATFRDLKSQVGNQSKHFATAQAVNGNNPAYGIFQCRNYLSISDCLKCFDFAADHIRNCSVGATGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGDKAKNSTELASTVEQVLTNLGTATPRIPGYYAATKTPVPNTNGSSIYAFAQCLETLTQSGCQDCLNTGLKNFQICLPNSNAKTYDAGCFIRYSTTAFFADNQTTNIKHFLKQGGSSKKKAIIGGVVGGVSFILILLALFALYIRSTASKRNPRGDILGATELKGPVNYRYKDLKTATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERFLVYEYMKNNNVGQFLFGENKGSLSWKQRYNIILGTARGLAYLHEEFHVCIIHRDIKTSNILMDDDFQPKIADFGLARLLPKDQSHLNTKFAGTMGYTAPEYAMHGQLSEKVDTYSYGVVLLEIISGQKSGELKIDESSELLLQRAWKLYDRGMHMEFVDKTLDPNEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKSKGLMENKKPTMPVYVDPNFRPRTNGSTPNGTSYSHATISISSISGR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1253 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Acco05g1253 647 FunFam Cysteine-rich receptor-like protein kinase 2 142 245 - -
Acco05g1253 647 Gene3D - 142 245 IPR038408 -
Acco05g1253 647 Gene3D - 29 134 IPR038408 -
Acco05g1253 647 CDD STKc_IRAK 334 600 - -
Acco05g1253 647 Gene3D Phosphorylase Kinase; domain 1 294 404 - -
Acco05g1253 647 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Acco05g1253 647 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Acco05g1253 647 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Acco05g1253 647 Pfam Protein kinase domain 328 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1253 647 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Acco05g1253 647 Gene3D Transferase(Phosphotransferase) domain 1 405 613 - -
Acco05g1253 647 SMART serkin_6 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1253 647 FunFam Cysteine-rich receptor-like protein kinase 2 405 607 - -
Acco05g1253 647 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Acco05g1253 647 MobiDBLite consensus disorder prediction 621 647 - -
Acco05g1253 647 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1253 647 FunFam Cysteine-rich receptor-like protein kinase 2 295 404 - -
Acco05g1253 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 623 - -
Acco05g1253 647 MobiDBLite consensus disorder prediction 617 647 - -
Acco05g1253 647 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Acco05g1253 647 SUPERFAMILY Protein kinase-like (PK-like) 308 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1253 Acco-ChrAcco05 25696145 25701204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1253 1 647 Receptor kinase-like Gene Family AT1G70520 36.652 1.25e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1253 Pkinase 2.2e-51 CL0016