Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1239 ATGCTTCAACCTAATAATCTCCTTGCTTTGATCGTCACTTTCACGTCCTGGTCATGGTGCACACTTAACGGCGTCATTTCAGATCCACAGACAAATCTTGTAAATAAAGGGTGCTCGCCATCGTCGGCCGTCTTGTCCAACTCCTCCATGTTCAGTGAAAATGTTGACAACACGTTTCGAGACATCAGAGAGCAGCTTCTTAACATGAAAAAGCACTTCGTGACTGCACAGCAAGCCAATCCAGAAAACCCAGTTTTGACACTTTTTCAGTGCAGAAACTACCTCTCTGTTAATGACTGTGTTGCCTGCTTCAACGTTGCCGCCGTGCAAATCCGCGAATGCCCCACCACAGCACAAGGTGGCCGTGCCGTTTACGACGGTTGCTTCCTCAGGTACGAGACCTATGCTTTCTTTGACCAGACACAAGACGATTTCAATGCCGTATTGTGTGGTAATCAAACTGTTAGAGAATCATCAACTACATTATTTACCTCAGTTGTGCAACAAGTGATGGTGAATCTCCAAGCAACAACACCCAAAACACAAGGGGTTTTCGTGGCGACAAAAGCACAATTGCCTGATAATAATAACAATAATAATGGTACAACTATTTATGCATTTGCTCAATGTGTTGAAACTATAACTCAGAGTGGGTGTGAAGATTGCTTGAAGACTGGTTATAGCAATTTGCAAACATGTCTTCCCAATTCTGATGGTAAGACTGAAGCTAATGGATGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTCATAACCAGACCTTTCATATCCTACAACCCTTGATCAAACAAGCTGGTTCAAGTAAGAAGGGGGCCATTGTAGGTGTAGTTGTTGGAGGAGACATATCTGGAGTAAGTAAGTTGAAAGGCCCAGTTATTTTTAGTTATAGGGAGTTGAAGTTTGCTACTAAAAGTTTCAGTGCAGAAAATAAACTCGGAGAAGGTGGATTTGGTGCTGTGTATAAGGGTACTTTGAAGAATGGAAAATTAGTTGCTGTGAAGAAATTAACTTTACGCCAGTCTAAGAAGGTGGATGAAGAATTTGAAAGTGAAGTGAAGCTTATAAGCAATGTTCATCATCGGAATCTTATTCGACTACTCGGATGTTGCAGTGAAGGCAATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGCCTTGAAAAATTTTTATTTGGTAACAATAGAGTACTAGAGATCATAAGTGGTGAACGGAACAATAAACTGAATGTAAATAGTGATTGTGAATGCACATTCCTTCTTCAAACAGCTTGGAAGCTATATGAGAGAGGGTTACACACAAAGTTGGTGGACAATACCTTGGACCTTAATGAGTATGAAGCAGAAGTGAAGAAGATAATAGAGATTGGTCTGCTTTGCACCCAAGCATCTACTGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTCCAAGGCAATAGGGACTTGTTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA 1521 0.4063 MLQPNNLLALIVTFTSWSWCTLNGVISDPQTNLVNKGCSPSSAVLSNSSMFSENVDNTFRDIREQLLNMKKHFVTAQQANPENPVLTLFQCRNYLSVNDCVACFNVAAVQIRECPTTAQGGRAVYDGCFLRYETYAFFDQTQDDFNAVLCGNQTVRESSTTLFTSVVQQVMVNLQATTPKTQGVFVATKAQLPDNNNNNNGTTIYAFAQCVETITQSGCEDCLKTGYSNLQTCLPNSDGKTEANGCFMRYSTTSFFPHNQTFHILQPLIKQAGSSKKGAIVGVVVGGDISGVSKLKGPVIFSYRELKFATKSFSAENKLGEGGFGAVYKGTLKNGKLVAVKKLTLRQSKKVDEEFESEVKLISNVHHRNLIRLLGCCSEGNERILIYEYMKNTSLEKFLFGNNRVLEIISGERNNKLNVNSDCECTFLLQTAWKLYERGLHTKLVDNTLDLNEYEAEVKKIIEIGLLCTQASTELRPSMSEVIVLLQGNRDLLENMRPTMPILIET 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1239 506 ProSiteProfiles Protein kinase domain profile. 313 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1239 506 Gene3D Transferase(Phosphotransferase) domain 1 404 498 - -
Acco05g1239 506 ProSiteProfiles Gnk2-homologous domain profile. 143 255 IPR002902 -
Acco05g1239 506 FunFam Cysteine-rich receptor-like protein kinase 2 287 389 - -
Acco05g1239 506 FunFam Cysteine-rich receptor-like protein kinase 2 145 255 - -
Acco05g1239 506 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Acco05g1239 506 ProSitePatterns Protein kinases ATP-binding region signature. 319 342 IPR017441 GO:0005524
Acco05g1239 506 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 405 504 - -
Acco05g1239 506 SUPERFAMILY Protein kinase-like (PK-like) 295 406 IPR011009 -
Acco05g1239 506 Gene3D Phosphorylase Kinase; domain 1 289 389 - -
Acco05g1239 506 Pfam Salt stress response/antifungal 45 135 IPR002902 -
Acco05g1239 506 Pfam Salt stress response/antifungal 150 252 IPR002902 -
Acco05g1239 506 Pfam Protein tyrosine and serine/threonine kinase 315 413 IPR001245 GO:0004672|GO:0006468
Acco05g1239 506 Gene3D - 30 137 IPR038408 -
Acco05g1239 506 Gene3D - 143 255 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1239 Acco-ChrAcco05 25532149 25536538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1239 405 505 Receptor kinase-like Gene Family AT1G70520 31.776 5.16e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1239 PK_Tyr_Ser-Thr 5.1e-19 CL0016