Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1232 ATGAAAGGAGAGATTAATGAAGATGTGCTTTGCGCCACCGGAACTTCTTTCTTCTTCCAATTTCGCTGGTTGAGCTTCTGTCATCTGTATTCCGTCCTCCCCATGGCCGACGTCATTCCTCAGCCGTCAACTCAAGATCTCTCCGAGCCAGTCATTGACGTCAAACTCTTCAACCGATGGACCTTTGACGATGTTCAGGTAAACGACATATCCTTGGCTGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACTGCTGGGAGGTATTCAGTCAAGCGTTTCAGGAAGGCACAGTGTCCAATTGTTGAGAGGCTTACCAACTCTCTGATGATGCATGGAAGAAACAATGGGAAGAAGCTAATGGCGGTGAGGATTATTAAGCACGCAATGGAAATTATCCACTTGCTCACTGATCAAAATCCCGTTCAAGTTATTGTTGATGCTGTGATCAACAGTGGACCAAGAGAAGATGCTACACGTATTGGATCTGCTGGTGTTGTCAGACGTCAAGCTGTGGATATTTCTCCTCTGCGACGTGTGAATCAGGCAATTTACCTCCTCACTACAGGAGCCCGTGAGTCTGCATTCAGGAACATTAAGACGATTGCAGAATGCTTGGCTGATGAACTTATCAATGCTGCTAAGGGATCTTCAAACAGCTATGCCATTAAGAAGAAGGATGAGATCGAGAGAGTTGCTAAGGCCAACCGTTAA 729 0.4636 MKGEINEDVLCATGTSFFFQFRWLSFCHLYSVLPMADVIPQPSTQDLSEPVIDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPVQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1232 242 Pfam Ribosomal protein S7p/S5e 96 242 IPR023798 -
Acco05g1232 242 Gene3D Ribosomal protein S7 domain 36 242 IPR036823 -
Acco05g1232 242 SUPERFAMILY Ribosomal protein S7 55 242 IPR036823 -
Acco05g1232 242 PANTHER RIBOSOMAL PROTEIN S7 45 242 IPR000235 GO:0006412
Acco05g1232 242 ProSitePatterns Ribosomal protein S7 signature. 108 134 IPR020606 GO:0003723|GO:0003735|GO:0006412
Acco05g1232 242 FunFam 40S ribosomal protein S5 38 242 - -
Acco05g1232 242 NCBIfam 30S ribosomal protein S7 54 242 IPR005716 GO:0003735|GO:0006412|GO:0015935
Acco05g1232 242 CDD uS7_Eukaryote 55 242 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1232 Acco-ChrAcco05 25433166 25436197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1232 53 242 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.053 6.74e-132 369