Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1181 ATGGATGCAATAAGCTACTTGAAAGCAGTGAAAACAACATTTGACAGCGACAACGAAACAGAAAGATATAATATGTTCGTTGCAATCTTAAAAGATTTCAAGAACAAAGGTTTCTTAGCACAGATTAAGGAAGTATTGAGAGGGCATGCCTTTTTGATTCTGGGATTAAATGTCTTCATGCCAGAAGGATATGAGATCACTCTTTCTTATGAAGATCAACCTTGTAAAGGGCAAAAGAGGCAAATGAATGAGAACCCTCCTAACAGTTCTAATAATTTCAAGAAGCCTAAGATGAACGAAACTAAACCCATTCAAGAAATTGATGACCTCAACAAAGGCAAGCGTGGTTACAATAATAATAAGAATAGGATCAATAATAATGATAAGGCTATTAATAAAAATAATCAAAAGAAGACTCCTGATTTGATGCCTAGAGAAATTGATCTGAACAAATGTGAACGTTATGGTAGCAGCTACGTGTGTTTGCCTGAAGATTACAAGAGCCTCTAG 510 0.3529 MDAISYLKAVKTTFDSDNETERYNMFVAILKDFKNKGFLAQIKEVLRGHAFLILGLNVFMPEGYEITLSYEDQPCKGQKRQMNENPPNSSNNFKKPKMNETKPIQEIDDLNKGKRGYNNNKNRINNNDKAINKNNQKKTPDLMPREIDLNKCERYGSSYVCLPEDYKSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1181 169 Coils Coil 107 127 - -
Acco05g1181 169 MobiDBLite consensus disorder prediction 74 98 - -
Acco05g1181 169 PANTHER SIN3B-RELATED 2 168 IPR039774 GO:0003714
Acco05g1181 169 ProSiteProfiles PAH domain profile. 1 63 IPR003822 GO:0006355
Acco05g1181 169 SUPERFAMILY PAH2 domain 2 62 IPR036600 GO:0006355
Acco05g1181 169 MobiDBLite consensus disorder prediction 74 143 - -
Acco05g1181 169 MobiDBLite consensus disorder prediction 99 116 - -
Acco05g1181 169 MobiDBLite consensus disorder prediction 117 138 - -
Acco05g1181 169 Gene3D Paired amphipathic helix 2 61 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1181 Acco-ChrAcco05 24469989 24470718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1181 2 72 WRKY Transcription Factor Family AT4G12020 38.158 8.36e-11 57.8