Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1175 ATGGTGAAAATGATGGCCATCTTGGTCCCCGTCGCTCACAATTTCTGCAGCATTCGTTGTTTCGACTTGGTCTTAAATGTAACACTCTCGAGGTTTCACACTTTAGTCTCCCTTGCTGATGCTTTCTTCTACTACCGGATTAAAAGATTGCCCTCTCTGGTTTGGAAGTATGGAGTTGTTTTCAGCCTGTGGTTCTTCTGGTTTTCGCTACTGGTTGCTGCGCAGGATTATATCACTGATCCCACTGAAGTTGGCGCATTGAAAACCATCAAGCAAAGTCTGGTTGATCCTAATAGGAATCTGAGGAACTGGGATCGTGGAGATCCATGTAGATCTAACTGGACAGGGGTTGTATGCCATAATAAGATACTAACTGATGGTTATCTCCACCTTAAAGAGTTGCAACTATTCGGTATGAATTTTACTGGAACTTTGGCAATGGAGATTGGCCGCTTGGCTTATCTGAAAATATTGAGCTTCATGTGGAACAACATAAGTGGGAGCATCCCCAAGGAAATTGGCAATATCAAGACTTTGGAGCTCTTACTCTTGAATGGAAACCATTTAACAGGTTCTCTGCCCGAAGAGCTTGGCGATCTTCCGAAGTTAAACAGAATACAAATTGATCAGAACAAAATATCAGGACCCTTACCTGCATCATTTGCAAACCTGAACATGACAAAGCACTTTCACATGAACAACAATTCAATCAGTGGACAAATCCCACCAGAGCTCTCCCGCTTGCCAAATCTTGTTCACCTTCTTCTTGACAATAACAACTTATCAGGATATCTTCCTCCTGAGCTCTCTCAGATGCCCAACATAACCATCATTCAACTTGATAACAATAACTTCAGTGGGAGAACCATTCCAGCGTCTTATGCCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAGCTTGCAAGGACCAGTTCCTGATTTAAGTCCGATACCGCAACTTGGTTATCTTGACCTGAGTTACAACGAGTTGACTGGACCGATTCCTCCCAATAAGCTTGCTGACAATCTTACAACAATCGATTTGTCGAACAACAAGCTTTCTGGAACCATTCCACGCTATTTTTCTCGTCTTCCTCTTCTTCAGAGATTGTCAATTGCAAACAATTCTTTGAATGGCAGTATTCCTTCAGCCATTTGGCAGAGCAGGACTTTAAATGCAACGGAAAGTTTTATCATGGAATTTCAACACAATAATTTTTCAAGCATATCAGGCAGCACTAGCCTTCCTCCAAATGTCTCACTCTGGCTTGAGGGAAATCCTCTTTGTTCAAATGATAGCCTGGGTCAGTTCTGTGGATTAGAAGCCAATAACACTGATACTATGTTTTCAACAAACTTCAATGGTAGCTGTCTTATTGCATCGTGTCCTCCTCCTTATGAATATTCTCCATTATCCCCAGTGAGGTGTTTCTGTGCTGCCCCTTTGATTGTTGAGTATCGGTTGAAAAGTCCAGGAATTTCAGCTTTTCCTTCTTATATCGACCTATTTGACAACTATCTGTCAAGTGGACTTGACATATTCCTTTATCAACTACACATTGATACGTACTTTTGGGAAGAAGGGCCACGTCTGAGAATGCTCTTGAAGCTTTATCCTGTCTATAATTTTCAGAACCAAACCCAACATATTTTCAACAGAAGCGAGCTTCTAAGGCTAAGGAACCAGTTCACAGGATGGTTAATTCCTGACAGCGATATATTTGGGCCTTATGAATTACTTGGCTTCGATCTCCTGGATCCTTACAAGGATTTGATAGAAACCTCTAAAAAAAGTTCAGGGATAAGCACGGGTGCATTGGTTGGCATAATAATAGGGACAATTGCCTTTGCTGTTGTAGCATCTGTAATTGTCAGTCTTGTTATGTTCAGAGTGCTCACGAGACGCCGTCGTACAATATCAAAACGACATCAAACTTCAAAGATTTCCATAAAAATTGATGGTGTGAGGGCCTTTACATATGAAGAAATGGCACAGGCTACTAACAACTTTAGCAACACAGCAAAAATTGGCCAAGGGGGTTATGGGAAAGTTTATAAAGGGATTCTTGTTGATGGCACTGTGGTTGCCATAAAGCGTGCACAGGAGGGATCCCTGCAAGGTGAGAGGGAGTTCCTCACAGAAATACAATTATTATCCAGGGTACATCATCGTAACCTTGTGTCTTTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGATTTATGAATTTATGTCAAATGGCACGCTTAGGGATCACCTTTCTGCTACTTCAAAAGAATCTCTGAGTTTTGCTATGAGAATAAGGATTGCACTAGGGTCAGCCAAAGGTCTTCTGTATCTACATACAGAAGCGGATCCACCAATATTCCACCGAGATGTCAAGGCTAGCAACATATTATTGGATCCAAGGTTCAATGCAAAAGTTGCTGATTTTGGACTATCACGACTTGCCCCTGTTCCAGACATTGAAGGAGTTGTGCCAGCTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAGTTGACTGACAAGAGTGATGTTTACAGTCTTGGTGTTGTATTTCTGGAACTATTGACGGGGATGCAACCAATCTCTCATGGCAAAAATATTGTTAGAGAGGTTAATATTGCATATCAAACTGGGTTGACATTCTCTGTTATTGATGGACGCATGGGGTCTTACTCTTCAGAGTGCGTTGAGAAGTTCTTGGCTCTGTCCTTAAAGTGTTGCCAAGATGAGCCAGATGCGCGGCCTAACATGGCAGAAGTGGTTCGAGAGCTTGAAAATATATGGTCTATGATGCCAGAGTCTGATACCAAGAGACCTGAATCTATAACTCCTAGTAGTGATTCTGGAAAATTGGTCAGTTCATCTTCATCTTCTGCTATAAAGACTCCCTATGTATCAGGAGATGTTTCCGGTAGTGACCTTATCAGTGGGGTGGCACCGACCATCGCGCCAAGATAG 3012 0.4207 MVKMMAILVPVAHNFCSIRCFDLVLNVTLSRFHTLVSLADAFFYYRIKRLPSLVWKYGVVFSLWFFWFSLLVAAQDYITDPTEVGALKTIKQSLVDPNRNLRNWDRGDPCRSNWTGVVCHNKILTDGYLHLKELQLFGMNFTGTLAMEIGRLAYLKILSFMWNNISGSIPKEIGNIKTLELLLLNGNHLTGSLPEELGDLPKLNRIQIDQNKISGPLPASFANLNMTKHFHMNNNSISGQIPPELSRLPNLVHLLLDNNNLSGYLPPELSQMPNITIIQLDNNNFSGRTIPASYANMSKLLKLSLRNCSLQGPVPDLSPIPQLGYLDLSYNELTGPIPPNKLADNLTTIDLSNNKLSGTIPRYFSRLPLLQRLSIANNSLNGSIPSAIWQSRTLNATESFIMEFQHNNFSSISGSTSLPPNVSLWLEGNPLCSNDSLGQFCGLEANNTDTMFSTNFNGSCLIASCPPPYEYSPLSPVRCFCAAPLIVEYRLKSPGISAFPSYIDLFDNYLSSGLDIFLYQLHIDTYFWEEGPRLRMLLKLYPVYNFQNQTQHIFNRSELLRLRNQFTGWLIPDSDIFGPYELLGFDLLDPYKDLIETSKKSSGISTGALVGIIIGTIAFAVVASVIVSLVMFRVLTRRRRTISKRHQTSKISIKIDGVRAFTYEEMAQATNNFSNTAKIGQGGYGKVYKGILVDGTVVAIKRAQEGSLQGEREFLTEIQLLSRVHHRNLVSLIGYCDEEGEQMLIYEFMSNGTLRDHLSATSKESLSFAMRIRIALGSAKGLLYLHTEADPPIFHRDVKASNILLDPRFNAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQTGLTFSVIDGRMGSYSSECVEKFLALSLKCCQDEPDARPNMAEVVRELENIWSMMPESDTKRPESITPSSDSGKLVSSSSSSAIKTPYVSGDVSGSDLISGVAPTIAPR 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1175 1003 MobiDBLite consensus disorder prediction 948 1003 - -
Acco05g1175 1003 Pfam Leucine rich repeat 345 392 IPR001611 GO:0005515
Acco05g1175 1003 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 749 959 - -
Acco05g1175 1003 Gene3D Ribonuclease Inhibitor 199 287 IPR032675 -
Acco05g1175 1003 Gene3D Ribonuclease Inhibitor 82 198 IPR032675 -
Acco05g1175 1003 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 81 239 - -
Acco05g1175 1003 FunFam Leucine-rich repeat protein kinase family protein 637 748 - -
Acco05g1175 1003 SUPERFAMILY Protein kinase-like (PK-like) 658 968 IPR011009 -
Acco05g1175 1003 PANTHER RECEPTOR-LIKE PROTEIN 55 90 946 - -
Acco05g1175 1003 Pfam Leucine rich repeat N-terminal domain 82 119 IPR013210 -
Acco05g1175 1003 Gene3D Transferase(Phosphotransferase) domain 1 749 963 - -
Acco05g1175 1003 Gene3D Phosphorylase Kinase; domain 1 643 748 - -
Acco05g1175 1003 Gene3D Ribonuclease Inhibitor 288 459 IPR032675 -
Acco05g1175 1003 Pfam Protein kinase domain 674 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1175 1003 SMART serkin_6 673 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1175 1003 MobiDBLite consensus disorder prediction 954 983 - -
Acco05g1175 1003 CDD STKc_IRAK 679 945 - -
Acco05g1175 1003 ProSiteProfiles Protein kinase domain profile. 673 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1175 1003 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 240 342 - -
Acco05g1175 1003 SUPERFAMILY L domain-like 94 462 - -
Acco05g1175 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Acco05g1175 1003 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1175 Acco-ChrAcco05 24402392 24413659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1175 59 955 Receptor kinase-like Gene Family AT5G01950 58.507 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco05g1175 Pkinase 7.6e-46 CL0016