Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1135 ATGTCTTCTAGAAGGCCATGCCTTCTAGAAGGCCTTGCCAAACCCAGGAGCGCACCCCTCCACGTCTCGTCTCTCTCTTCATTTGCGTTACCAAGTTCACACCAAAAACCTACTCCTACCAGAAATATTCTCCGGTTTTACCCTTCCCCCATCACTATGTCCCAAACCCTCGACCTCCCCCTCCCCGCCGGCCGGCTACTCCGGTCATCCTCATCCTCTGCCTCCGCCTCCGCCTCTTCCCGCAGATTTCTGCGGCTTGAACCTGTAAAGTCCTCAAAGAAATGCAGAGCTTCGATCGGCGCCGTCGCGACAGAGGCCAATCCGGCAGTGATTGATTCTCGGCGGCCATTGAGTCTCTATGAGGTGCTCCGAGTCAACCAGAATGCGTCTCCGACGGAAATTAAGTCTGCGTATAGGAGTTTGGCCAAGCTGTACCATCCTGATTCGACGGTTTGCCAATCGGAATCGGACGGAACGGACTTCATCGCGATCCACAACGCCTATGAGACGCTCTCCGATCCGTCGGCCCGAGCACTGTATGATCTGTCGTTGAGGGCTGCTCTCCGGAGGAGGCGTCCGTATCTGTCGTCGACGACGCAAGATGGTTCTTCCGGATTTTATACGACCCGAAGATGGGAGACGGATCAATGCTGGTAG 657 0.5556 MSSRRPCLLEGLAKPRSAPLHVSSLSSFALPSSHQKPTPTRNILRFYPSPITMSQTLDLPLPAGRLLRSSSSSASASASSRRFLRLEPVKSSKKCRASIGAVATEANPAVIDSRRPLSLYEVLRVNQNASPTEIKSAYRSLAKLYHPDSTVCQSESDGTDFIAIHNAYETLSDPSARALYDLSLRAALRRRRPYLSSTTQDGSSGFYTTRRWETDQCW 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1135 218 Gene3D DnaJ domain 107 202 IPR036869 -
Acco05g1135 218 SMART dnaj_3 117 176 IPR001623 -
Acco05g1135 218 Pfam DnaJ domain 119 181 IPR001623 -
Acco05g1135 218 ProSiteProfiles dnaJ domain profile. 118 184 IPR001623 -
Acco05g1135 218 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 66 218 - -
Acco05g1135 218 CDD DnaJ 120 173 IPR001623 -
Acco05g1135 218 PRINTS DnaJ domain signature 138 153 IPR001623 -
Acco05g1135 218 PRINTS DnaJ domain signature 156 176 IPR001623 -
Acco05g1135 218 PRINTS DnaJ domain signature 120 138 IPR001623 -
Acco05g1135 218 SUPERFAMILY Chaperone J-domain 117 190 IPR036869 -
Acco05g1135 218 ProSitePatterns Nt-dnaJ domain signature. 161 180 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1135 Acco-ChrAcco05 23449051 23449875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1135 120 181 C2H2 Transcription Factor Family AT1G74250 46.970 6.60e-09 53.5