Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1126 ATGGGCGATTCAACGTGCAGAGTGGAAACAACCTCTCGTCTTGCCCAATGGAGAATCGACTACTTGGCTACCTGTACTTACAAAAAGTCTGATCCTTTCAAGATTGGCATGTGGAACTGGTATTTGACTCTAGAAAAGCACCGGAGTGCGTTCCTTAGGTTATACCCAGAAATGTCCGATCTTTCCAGAGAAAAACCACCCATCGCATCTCTAATCGTAAGGGTTGTTAATTTTTATGGAGATCGCAAGACCATGACATATTTAGAAATAAAGGACAGATTGATCAAGCCCAACGAAGACTTAGCTTGGCCAATTGAGGTCCCACAAACTGGAAAATTCATTATTGACATTGAGTTCCTGGATTTAAAGACTGCATCCCCAAAGGATGAACCTTGCTCCATCTGGGATGATCAAATTATGCAGAAAGCCTCAGATGAAACAGCCCTTCAATCACTTGGTCTGATGCTAGCAGAAAACATCCATGCAGACATCATGATCAATGTTGCAGATGGAAGCATCCAGGCCCATCGTGCTGTTCTTGCTGCACGATCGCCTGTCTTCAAAAGCATGTTCTCATATAATCTTAGGGAGAAAGAGTTATCTGCCATAGACATCCCAGACATGTCAGTTGAAGCTTGCCGAGCCTTTCTCAGTTATATTTATGGGAGCATCAAGCATGAAGAATTTGTGGGACATCGGTTAGTCCTTCTGCATGCAGCTGATAAGTATGACATTCCTGACTTGAAAGAGGCATGCCAGCAGAGTCTTCTCAAAGATATTGATTCAAAAAATGTACTTGAGAGACTCCAAAATGCATGTTTATATGAACTGCCGGACTTGAAGAAGAACTGCATGCAATATCTTGTGAAATTTCGTAAATTATATGACATTCGGGATGATGTTAAAGAATTCGTTCAATATGCAGACAGAGATCTGATCGCTGAAATCTTCAATGAAATGATCATTTCCTGGAAAGGATTCTGA 984 0.4157 MGDSTCRVETTSRLAQWRIDYLATCTYKKSDPFKIGMWNWYLTLEKHRSAFLRLYPEMSDLSREKPPIASLIVRVVNFYGDRKTMTYLEIKDRLIKPNEDLAWPIEVPQTGKFIIDIEFLDLKTASPKDEPCSIWDDQIMQKASDETALQSLGLMLAENIHADIMINVADGSIQAHRAVLAARSPVFKSMFSYNLREKELSAIDIPDMSVEACRAFLSYIYGSIKHEEFVGHRLVLLHAADKYDIPDLKEACQQSLLKDIDSKNVLERLQNACLYELPDLKKNCMQYLVKFRKLYDIRDDVKEFVQYADRDLIAEIFNEMIISWKGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1126 327 SUPERFAMILY POZ domain 147 258 IPR011333 -
Acco05g1126 327 Pfam BTB/POZ domain 158 258 IPR000210 GO:0005515
Acco05g1126 327 SMART BTB_4 162 260 IPR000210 GO:0005515
Acco05g1126 327 Gene3D Potassium Channel Kv1.1; Chain A 135 290 IPR011333 -
Acco05g1126 327 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Acco05g1126 327 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Acco05g1126 327 PANTHER OS08G0495500 PROTEIN-RELATED 5 326 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1126 Acco-ChrAcco05 23280394 23282624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco05g1126 BTB 3.3e-22 CL0033