Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1118 ATGAAATCGAGTCAACAAATTATGATATTTTGTGGAGAAGGCTTAACGCTGACTTGGACTCTTCTGATTCTACCTATAATCCAATTGCATTTTGGTTTTGCTCTTCTCTCGCATTCGGGTTCTGCTCTCCACTTCTCTCTGTTTCCTTCTTCTCCTTTTGCGATTCGATTTGAAGTGCTTTTCAGAGGATTTGAGCGCAGGAAGGGGATTAGCTTTGCTGCGTACATCGTTGAGCAGCCATATCTGACTAGAGTCTTTGTCACTAAGTTGGCCGAAAAACACCCCTTCCCCTGGGAAAGGGAAAAAAATCAGGGAAGGCCAGACACAGGAGTGTTCCATCGTCTGTATCTACCGACTCTCATGAAATGCACCCAAAAGACTAATTGTGTCATTTTGGGAAAATTATCAAATGCAATGTCGCTGCCAATGGCTGCTAAATCTGTTGTAGACTTAATGGAGTCATCCTCCGGGGTTCATTATTCAGGATTTCACATGGATGCTTTAAATAAAATAAATGCTGGAACTGAGCGTCCAACAACTTGTGTAGCTGACCACATCTATAATCAACCTTTTGTCATAGGTGTTGCTGGTGGGGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAACAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGAAATTGCTTGGAGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGTGCTGCATTTCCAGCTAGACGGGTAAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACATGTTCGGGAGTTGATGAATATGAAGATATTTGTAGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACAGTTCAGAAGAGTCGGGATATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCGACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTGCAGCACATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATCCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAATAAAAACACATGATTTTGTGTTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTAGGACATCTACCATTTACAGAAAAGCAAGTAATCACTCCAACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCCGTCATTAGGAGCGGGGAGAGTATGGAGAATGCCTTACGAGCATGCTGTAAAGGTATCAAGATTGGCAAGATTCTTATTCATAGAGAAGGGGAAGGAGACGACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTGAATCTCATATCGGCGCCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAGATTGTGACGTCTGAGATTGAATTGGGCCTGAATAAAGACTTCCGTGTTGTGCCGGGCATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGAGGATCAGCAGGTGGTGGTCCCTTCATAG 1866 0.4137 MKSSQQIMIFCGEGLTLTWTLLILPIIQLHFGFALLSHSGSALHFSLFPSSPFAIRFEVLFRGFERRKGISFAAYIVEQPYLTRVFVTKLAEKHPFPWEREKNQGRPDTGVFHRLYLPTLMKCTQKTNCVILGKLSNAMSLPMAAKSVVDLMESSSGVHYSGFHMDALNKINAGTERPTTCVADHIYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEKLLGVMDKLKHGQAVDIPNYDFKSYKSAAFPARRVNPSDVIILEGILIFHDPHVRELMNMKIFVDTDADVRLARRIKRDTVQKSRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGEGDDSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDEDQQVVVPS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1118 621 Pfam Phosphoribulokinase / Uridine kinase family 192 378 IPR006083 GO:0005524|GO:0016301
Acco05g1118 621 NCBIfam uridine kinase 189 390 IPR000764 -
Acco05g1118 621 CDD UMPK 203 390 IPR000764 -
Acco05g1118 621 FunFam Uridine kinase 394 611 - -
Acco05g1118 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 383 IPR027417 -
Acco05g1118 621 Gene3D - 394 611 IPR029057 -
Acco05g1118 621 SUPERFAMILY PRTase-like 393 612 IPR029057 -
Acco05g1118 621 FunFam Uridine kinase 187 393 - -
Acco05g1118 621 Pfam Uracil phosphoribosyltransferase 408 611 - -
Acco05g1118 621 Gene3D - 187 393 IPR027417 -
Acco05g1118 621 CDD PRTases_typeI 467 584 IPR000836 -
Acco05g1118 621 PANTHER URIDINE KINASE 182 521 - -
Acco05g1118 621 PRINTS Uridine kinase signature 220 231 - -
Acco05g1118 621 PRINTS Uridine kinase signature 190 207 - -
Acco05g1118 621 PRINTS Uridine kinase signature 265 280 - -
Acco05g1118 621 PRINTS Uridine kinase signature 358 371 - -
Acco05g1118 621 PRINTS Uridine kinase signature 322 332 - -
Acco05g1118 621 PRINTS Uridine kinase signature 336 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1118 Acco-ChrAcco05 23148902 23158319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1118 143 614 PRT Gene Family AT4G26510 82.030 0.0 800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1127 10 25164101 25171483 Acco05g1118 05 23148902 23158319 CCT
Acco05g1118 05 23148902 23158319 Acco05g1118 05 23148902 23158319 ECH