Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1110 ATGGCTTCATCATCTTCCGCTAACTCATCTTCTCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAATTTCACTAGCCATCTTCATGATGCTCTTCAAAGAAACAAATTGGATACATACATCGACTACAGGCTAGAAAAAGGAGGTGAGGTATGGCCATCTCTTGAAAGAGCTATTGAAGATTCAACTTTGTTCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACTTGGTGCTTGAAGGAGCTTACAAAAATATTCGACTGCTCCAAAAATCAAGATCACCTCGTTATTCCAGTGTTCTATAGGGTAGATCCTTCACATGTGAGGAAGCAGTCAGAAAGTTACCAGAAAGCATTTGAAGAACTTGAGAACAAAGGCATCAACAAGCACCAATTGCAAATCTGGAGAGAGGCTCTCACTCATGCCGCAAATTTAGCTGGTTGGAGTTGCAGCTTGGATAGGAATGAAGCAGAGCTAATCAAAGAAATAATGAATTGTGGAAGTGAAACCATTGAAGGCATAACTCTGAACCTTTCAGAAGTTGAAGATATGTGCTTAAGTCCTCAAGCCTTTTGTTCAATGCCCAATCTAAAGTTCCTTGATTTTCATAAAAATTTCGATGATGATGAGGTCGGGACCAAGTTTCAATTCCCCTGTGGCATAGAGTTTTTGCCAGATAAACTCAGACTATTGCATTGGGAGGGATGGCCTTTAAAGTCCTTACCAGTAACATTCAAGGCTGAACATCTTGTTGAAATGATAATGCCCGGCAGCAATTTGACAAAATTATGGGATGGGGTGCAGAATCTCGTGAATTTAAGCAAAATTGATCTTGCTGGATCAAATGACTTGATTGAGCTCCCAGACTTTTCCAAGGCCATACATCTTACAGAAGTTCGTCTCCATGATTGTTTAAAATTGCAAAATGTTCATCCGTCAATTTTATCTCATCATAGCCTTTGTATTTTAAGTCTATATCGTTGTAAAGCTCTTACCAGCCTTACAAGCAATACCCACCTAAAATCACTTATTCATCTCAACCTGGAAGGATGCTCAAGACTGAACAAATTTTCAGTGACCTCTGCAAATTGTGAGTTTGCATTGACTCTTTCACGAACACCCATCAATGATGAGTTGTGCTCATCAAGTGGGAGTCTTAGCAAACTTTGTTCATTGTATCTAGGTGAATGCAAAAGTCTGAAAAGTCTTCCCAACAAATTGATTGACCTACGAAACCTTCGATTTCTTTTGGCGGATCGTTCTAATAAGTTAGTAGCAAATCTACATTCCATATTTGATGAAGTGCGAGCTTTGGAAGTTCTACAGTTGGCAGATTGTAGTGAGTTATTTGAACTGCCTGACAATATTGGCTTGTTGTCATCATTACGTGTGTTATGTCTCCTAGGGTCTAATATAGAGACTTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGAAATTTCTTAACTTGGATGGATGCAAAAGGCTTCGGTCTCTACCAAAACTCCCTCCCTCTATCTCTGAATTGACCACTATGAGCTGCCTATCCCTTGAGACCTTAGATTTTCTTTTAACCAATGCAGGTGAAGAAGTAAAACAAATATATGATGATTATGGACTTAGAAAGCATGCTTTCTTTCGTTTCTTGAATTGCATGAAGTTGGATCAACAATCAATCAAAGCTGTTATGGCCAAAGTGGTACTTATGATTCATAAAGGCATTTATGACGAAGTTTTCATGCAATATCCAGGAAAAATAGTTCCAAAGTGGTTCATGTATAGGACTACACAGAATGTTGTAACTATAGATCTCAATTCGATTCCACAACCTTGGGATGGCAGTTTCATTTTCTGTGTCATCTTTTCTAAGACAACACCGAGCATATACATTAATGCGATATGGTTAATTGATGGTGAATATGCTTGCTCAACTGATATATTATTTTCTACGAATGGTGAGTTATTGTCAGATCATGTTTTTATTTCGAGTCATCAAAATTCTTTTGGAGAAGTACAAAGGAAAATTGAAGAAAAGAAAAGAGATGCTCAGACCGACACTTATCATCCATTGCTTCAAATTGCATTCAAAGTGCACATTTTAGAGTTGTTGGGAAAAGCGAGGAACGTTTCAGGGCGTGGAGAAGCTGTAGCAGCAAATTATGCTTTTGGTCCAGCTGAAGATGATATAATAACAAAGCATAAGCTTCTCACACTTACATCAACCACAAGGGCCACCGTGATCAGAGACACAGAAGCTTATAAATTAGTTAGAGAAAGAGATTATGGCATTAGATGCAGAGAATACAGCAGGTTCGAGATTGTTGGATCTTCGGAAGAAACAATTTGCTCTTCTGTTGCATGTGAACACAATAGAGAAGAGCAGAAGAATCTTATGGAGGAGATGAGATCAGCACCTGAAGAGCTCAAGAATGGGATAGAAGATTCAGAAGCTATGGCTGTTGACTAG 2493 0.3863 MASSSSANSSSQSPKKYDVFISFRGEDTRFNFTSHLHDALQRNKLDTYIDYRLEKGGEVWPSLERAIEDSTLFLVIFSENYASSTWCLKELTKIFDCSKNQDHLVIPVFYRVDPSHVRKQSESYQKAFEELENKGINKHQLQIWREALTHAANLAGWSCSLDRNEAELIKEIMNCGSETIEGITLNLSEVEDMCLSPQAFCSMPNLKFLDFHKNFDDDEVGTKFQFPCGIEFLPDKLRLLHWEGWPLKSLPVTFKAEHLVEMIMPGSNLTKLWDGVQNLVNLSKIDLAGSNDLIELPDFSKAIHLTEVRLHDCLKLQNVHPSILSHHSLCILSLYRCKALTSLTSNTHLKSLIHLNLEGCSRLNKFSVTSANCEFALTLSRTPINDELCSSSGSLSKLCSLYLGECKSLKSLPNKLIDLRNLRFLLADRSNKLVANLHSIFDEVRALEVLQLADCSELFELPDNIGLLSSLRVLCLLGSNIETLPLSIKHLSSLKFLNLDGCKRLRSLPKLPPSISELTTMSCLSLETLDFLLTNAGEEVKQIYDDYGLRKHAFFRFLNCMKLDQQSIKAVMAKVVLMIHKGIYDEVFMQYPGKIVPKWFMYRTTQNVVTIDLNSIPQPWDGSFIFCVIFSKTTPSIYINAIWLIDGEYACSTDILFSTNGELLSDHVFISSHQNSFGEVQRKIEEKKRDAQTDTYHPLLQIAFKVHILELLGKARNVSGRGEAVAANYAFGPAEDDIITKHKLLTLTSTTRATVIRDTEAYKLVRERDYGIRCREYSRFEIVGSSEETICSSVACEHNREEQKNLMEEMRSAPEELKNGIEDSEAMAVD 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1110 830 SMART till_3 16 154 IPR000157 GO:0007165
Acco05g1110 830 Pfam TIR domain 16 175 IPR000157 GO:0007165
Acco05g1110 830 SUPERFAMILY L domain-like 193 528 - -
Acco05g1110 830 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Acco05g1110 830 Gene3D - 14 179 IPR035897 -
Acco05g1110 830 Gene3D Ribonuclease Inhibitor 377 542 IPR032675 -
Acco05g1110 830 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Acco05g1110 830 Gene3D Ribonuclease Inhibitor 180 376 IPR032675 -
Acco05g1110 830 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Acco05g1110 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 181 416 IPR044974 GO:0006952
Acco05g1110 830 Pfam Leucine Rich Repeat 258 277 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1110 Acco-ChrAcco05 23034587 23040797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1110 172 494 WRKY Transcription Factor Family AT4G12020 33.837 1.29e-33 138