Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1087 ATGAATTCAGGGTCCTTAATTTCCTTTGCTTCATCAAACTCTGCATCGAGAGAAGATAGAGTGGCTAGTACCAGAACCAGGCCTTCTCCTCATACTCCAAGGCCTTCTTTTTTTATTCGGACGGCCATGAGAATGTCAAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTTTTCCATTACCAGAATGGGTCAAGGTCTGATCTTGGCTCCAATCCGTTCAATTCCATCACATGGATGACTTTGGAGTTCATTGCTCTGATGGTTCAGATAAGCCTCACAACCTTGGTTTTAGCCATTTCTAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGTTGTCTTCTCAATCTGTTGCTTCTTTATGGGCGATATCGTCAGCTTTACTTGTCTCATGGTGATGCTCTTAGCATCTCTGATATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCACATTTAATGAACAAATGCCGGACTTCGCTCGAGCTTTTCTTCGCTATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCACGTTTCGGGTCATTCCAAAGAGCGCCGAAGCTGCACGTGCTCTGCATCTCCTTGATTGCTTGGAATGCCATAACCTACTCGTTTCCTTTCCTTCTCTTCCTCCTGCTGTGCTGCTGTGTGCCACTGATCAGCAGCCTCCTCGGTTACAACATGAACATGGCTTCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTCCCAAGTTGGAGATACAAACAAGTTCATAACAAGTTGGACAATGGCCATGATTCTGCAGCCAGTGAAGGACTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTCAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 999 0.4354 MNSGSLISFASSNSASREDRVASTRTRPSPHTPRPSFFIRTAMRMSRARWFTFLRRVFHYQNGSRSDLGSNPFNSITWMTLEFIALMVQISLTTLVLAISKRERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSISDMEQQRGNEETRCSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLIAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKQVHNKLDNGHDSAASEGLINEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLRIISCCPLCKQGLQR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1087 332 SUPERFAMILY RING/U-box 275 330 - -
Acco05g1087 332 MobiDBLite consensus disorder prediction 1 36 - -
Acco05g1087 332 Pfam Ring finger domain 285 327 IPR001841 -
Acco05g1087 332 SMART ring_2 286 326 IPR001841 -
Acco05g1087 332 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 330 - -
Acco05g1087 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 331 IPR013083 -
Acco05g1087 332 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Acco05g1087 332 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1087 Acco-ChrAcco05 22725573 22728233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1087 22 330 C3H Transcription Factor Family AT4G26580 71.519 2.61e-155 437