Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1080 ATGAAGCCATACACAGCCATGGCCATCATCAATTTTCTTCTGTGCATAGTCTTACAAACCTCGTTCAAAGCTAGAGCTGCCATGGCCATAGGGTCAGAGACCGATAGACTCGCTTTACTTGTTCTGAAAGATAAGCTAACCAATGGTTTTTCTTACAACAACTTGTCTGGAACTATTCCAACAAACATTGGCCTTGCTTTCCCGATTCTTCGATCTTTTAATGTGGGACACAACATGCTGTCGGGAACTATTCCTTCTTCATTTTCCAACATCTCTCAATTGCAATTGTTCGCAATATCTGAAAATGATTTTAGTGGCCTGGTACCTACCTCATTAGGAAGACTACAAAACCTTCAAAAATTTACGATCCACACCAATAATTTTGGGAGTGGAGAAGGTCATGACCTGGATTTCCTCTCATCCTTGACAAATTGTAGTCAATTACTTTACATAGAGATGCTGAATAATAACTTTAGTGGTGTATTGCCAAAGTCAATTGGGAATCTCTCTTCCCATCTTTCTATACTTAGCATGGGATTCAATCATATCTTTGGAAGCATACCATATGAGATTGGACAACTAGATGGCTTAACCTACCTTGGTTTGGAATCTAACTTTCTTCATGGCGCAATCCCGCATTCGATTGGAAAGCTTGGAAATCTTGGAAGGCTACTCCTTGACCATAATCAACTATCCGGTAGATTTTCTGATATCTTCGAAAATCTCACCAAGTTGTTTGAACTTTCGATGTCTAACAATAACTTGGAGGGAACCATTCCAGTAAGCCTCAAGCATTGCAAGGGTTTGCAATTCTTGTACATAAATGAAAATTACTTGACTGATATACCAAATCAAACTTTTGGTCATTTAGGAAGTTTGATATACCTTGACATGTCTTCCAACTACTTGATTGGTCCTGTTCCATCTGAGATTGGCAACATGAAGCAATTACCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCACACTTGGGAGACTTTGGATTAGCTAGGCTTGTTCATGAGGGTGAAAGATATTCTGGTGAGGGTCAAACTACATCCTCAGCAATTAAGGGAACTATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTCACGACACAAGGGGATATCTACAGCTACGGGGTTCTTATGCTAGAGATTCTCACCGGAAAGAAGCCAACAGATAGCATATTTTGTGAGGATCTAAGCCTACCCAAGTTCTGTAAGTTGGCATTGCCAAACAAAGTCCTTGAGATGGTGGATTCAAGCTTGTTGGTTCACCTTGATAGAGACCAAATGGAGTTTATGCAAGAGTCTCTATATAGTTTTGCTAGAATTGGGGTAGCATGTTGCGCAGAATTCCCAAGCGAGCGAATGGGGATAAAAGATGTTTTGAAGGAGCTGCGCACAATCAAACAGAGGTTATCTACATTTAACAATATAATGTCATATAAAATAGCTGCTTATATCTGA 1482 0.3988 MKPYTAMAIINFLLCIVLQTSFKARAAMAIGSETDRLALLVLKDKLTNGFSYNNLSGTIPTNIGLAFPILRSFNVGHNMLSGTIPSSFSNISQLQLFAISENDFSGLVPTSLGRLQNLQKFTIHTNNFGSGEGHDLDFLSSLTNCSQLLYIEMLNNNFSGVLPKSIGNLSSHLSILSMGFNHIFGSIPYEIGQLDGLTYLGLESNFLHGAIPHSIGKLGNLGRLLLDHNQLSGRFSDIFENLTKLFELSMSNNNLEGTIPVSLKHCKGLQFLYINENYLTDIPNQTFGHLGSLIYLDMSSNYLIGPVPSEIGNMKQLPSNVLLSDDMVAHLGDFGLARLVHEGERYSGEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEILTGKKPTDSIFCEDLSLPKFCKLALPNKVLEMVDSSLLVHLDRDQMEFMQESLYSFARIGVACCAEFPSERMGIKDVLKELRTIKQRLSTFNNIMSYKIAAYI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1080 493 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Acco05g1080 493 PANTHER OS04G0122200 PROTEIN 318 475 - -
Acco05g1080 493 ProSiteProfiles Protein kinase domain profile. 122 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1080 493 Pfam Protein tyrosine and serine/threonine kinase 320 469 IPR001245 GO:0004672|GO:0006468
Acco05g1080 493 Gene3D Ribonuclease Inhibitor 50 128 IPR032675 -
Acco05g1080 493 Gene3D Ribonuclease Inhibitor 140 214 IPR032675 -
Acco05g1080 493 Gene3D Transferase(Phosphotransferase) domain 1 320 486 - -
Acco05g1080 493 FunFam Leucine-rich repeat receptor protein kinase EMS1 139 238 - -
Acco05g1080 493 SUPERFAMILY RNI-like 50 317 - -
Acco05g1080 493 SUPERFAMILY Protein kinase-like (PK-like) 318 480 IPR011009 -
Acco05g1080 493 Gene3D Ribonuclease Inhibitor 215 319 IPR032675 -
Acco05g1080 493 SMART serkin_6 225 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1080 Acco-ChrAcco05 22489634 22492821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1080 283 477 Receptor kinase-like Gene Family AT3G47570 40.404 1.99e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco05g1080 Pkinase 2.9e-14 CL0016