Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1044 ATGTGTTCAAGAAGGACCCTAGTTCTGTTCTTTCTCTTCTTGTTCTTCTTTCTGAACCCAACAGTGTTGTCGCAAAACCTCACATTCGAATTTTCTTCCTTCACGTCTCTCCGGAACATCACTCTCGTCGGCGATTCCTTTCTCAGGAACGGCATCATCGGCCTCACCAGATTGTCCGACGTGCCCACTTCCAGCGCTGGAGCCGTAATCTACAACAATCCCGTTTCTCTCTTCGACCAACAATCAAACACTTCATCTTCATTCTCAACATCATTCTCTTTCTCCATCACCGATAACCTGAACAATCCTCCTTCCCTTGTGGATGGTTCCTTATCTTTCTTTCTATTTCCTAGCAACCACACCCTTGGGAGTATCGGCGGGTTTGTGGATCCTCTCAATTCCTCCCAATTAACCCGATCCAACTTTGTTGCGGTCAAATTCAACCCTAATGATAATCGAGTTGAGTTGGATCTAAACGGAATTGCTTCAATCAATGCCACCGGGGATACCATCTCACAGGGAATTGATCTTAAGAGTGGGGAATTGATCACAGCTTGGATTGATTACGAGAGTGAAAAGAGGAAGCTACAAGTGTCCCTGAGTTATAATAATTCGAGTTCAAACTTGAAGACTGAGAACCCAATTCTGAAGGTTGATGATCTTGACTTTTCAGGGTATATCAAGGAGATAGTGTACGTGGGATTTGCTGCTTCCACTGAGGGAAGCACTGAGCTTCATCATATTGTGGACTGGAGATTTCAAAGTAATGGATCTCTACCTTCAAAGTTTCGTACTCATAACGCCTCTAATAGCTTTGTGAGTGCAATAGTGGATGTTCATAATAGGTCCCATAATAATTCCAGCAACAAGCATGATAAAAGGCTTGGATTAATTATAGCCATTGCTGGTCCAGCTTTTTTCTGTGTATTCCTGGTATGTTTGGCCTATATTTCTGTACGGAAAAGGAGGAATAGCAGAACACTGAAGAGAGTGAAAAGTGAGTTGATGGCTTGTCCTAGAGAATTTAGTTACAAAGAATTGAAAGTAGCCACAAAAGGGTTTCACTCAAGCAGGATCTTGGGCCAAGGATCGTTTGGGACAGTTTATAAAGCCTTGTTTCTACCATCAGGAACCATTGCTGCTGTGAAAAGGTCAAGGCACTCTCATGATGGAAAAACAGAATTTCTAGCTGAACTTTCCATCATAGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGACAAGGGAGAACTGTTGCTTGTGTATGACTTCATGCCCAATGGAAGCTTAGATAAGATGCTCTACCAAGAATCTGAAGAGAGCCAGAACTTGTTGAACTGGTCTCGTAGACTTAATATTGCTATTGGGTTGGCTTCTGTTCTGATTTACCTCCATCAAGAATGTGAAAAAAGAGTCATTCACAGAGACATTAAGACTGGAAACATATTGCTAGACGCGAATTACAACCCAAGGTTGGGGGATTTCGGACTGGCGAAGCTGATGGATCATGACAGAAGCCCAGTTTCAACATTAACTGCAGGAACCATGGGGTATCTTGCACCTGAGTATCTTCAATATGGGATGGCTACTGAGAAAACTGATGTTTTCAGCTATGGTGTGGTTATTCTCGAAGTGGCATGTGGGAGGAGACCAATCGTAAGGGAAGGCCAAAACATGGTCAATTTGGTTGATTGGGTTTGGGGGCTACACTCTCAAGGGAAGATAATTGAAGCAGCTGATAAAAGGTTGAATGGAGAATTTACAGAGAAAGAGATGAAGAAACTTTTGCTTTTGGGATTGAGCTGTGTAAACCCAGATAGTGCTGGAAGGCCTTCCATGACTAGGGTTTTGCAGATTCTCGGCAACAACGATGAAGCAACAAGCACACTTATTGTGCCAAAGGTGAAACCATTCCTCACTTTCTCCAGTGGCTTACCTTTGAGTCTTGATGAGATTGTTTCAGATAGTGATGTGGAGTTCAGTACTGAGAAGTCCTTGCGTGAGATAAGAATTGACTGA 2034 0.4302 MCSRRTLVLFFLFLFFFLNPTVLSQNLTFEFSSFTSLRNITLVGDSFLRNGIIGLTRLSDVPTSSAGAVIYNNPVSLFDQQSNTSSSFSTSFSFSITDNLNNPPSLVDGSLSFFLFPSNHTLGSIGGFVDPLNSSQLTRSNFVAVKFNPNDNRVELDLNGIASINATGDTISQGIDLKSGELITAWIDYESEKRKLQVSLSYNNSSSNLKTENPILKVDDLDFSGYIKEIVYVGFAASTEGSTELHHIVDWRFQSNGSLPSKFRTHNASNSFVSAIVDVHNRSHNNSSNKHDKRLGLIIAIAGPAFFCVFLVCLAYISVRKRRNSRTLKRVKSELMACPREFSYKELKVATKGFHSSRILGQGSFGTVYKALFLPSGTIAAVKRSRHSHDGKTEFLAELSIIAGLRHKNLVQLQGWCVDKGELLLVYDFMPNGSLDKMLYQESEESQNLLNWSRRLNIAIGLASVLIYLHQECEKRVIHRDIKTGNILLDANYNPRLGDFGLAKLMDHDRSPVSTLTAGTMGYLAPEYLQYGMATEKTDVFSYGVVILEVACGRRPIVREGQNMVNLVDWVWGLHSQGKIIEAADKRLNGEFTEKEMKKLLLLGLSCVNPDSAGRPSMTRVLQILGNNDEATSTLIVPKVKPFLTFSSGLPLSLDEIVSDSDVEFSTEKSLREIRID 677
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1044 677 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1044 677 Gene3D - 24 257 - -
Acco05g1044 677 FunFam L-type lectin-domain containing receptor kinase VIII.1 318 429 - -
Acco05g1044 677 PANTHER - 41 627 - -
Acco05g1044 677 SUPERFAMILY Protein kinase-like (PK-like) 338 642 IPR011009 -
Acco05g1044 677 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Acco05g1044 677 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Acco05g1044 677 Pfam Protein kinase domain 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1044 677 CDD STKc_IRAK 360 625 - -
Acco05g1044 677 ProSiteProfiles Protein kinase domain profile. 354 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1044 677 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Acco05g1044 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 257 IPR013320 -
Acco05g1044 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Acco05g1044 677 Gene3D Transferase(Phosphotransferase) domain 1 430 638 - -
Acco05g1044 677 FunFam L-type lectin-domain containing receptor kinase VIII.1 430 646 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco05g1044 Acco-ChrAcco05 21873805 21875838 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1044 3 662 Receptor kinase-like Gene Family AT5G55830 55.621 0.0 723
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco05g1044 Pkinase 1.4e-48 CL0016