Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1033 ATGAGAAGCTTCACAGAGATGCAGATTCCGGAGGAATTCATCTTCCGAAGCCCTCATTCTGGGGTTGTCCCGGTCCCCGACAACGTGACGCTGCCGGAGTTTGTGCTTCAGAACTCCGAGCTGTACGCCGACAAGGTGGCATTCGTGGAGGTCGGGAGCGGGAAGGCGATAACGCACGGCCAGGTGGCGAGGGACACAGAGAGGTTTGCCAAAGCGTTGCGAAGTTTGGGTGTGAGGAAAGGCCATGTGGTGATTGCTGTGCTTCCCAATGTTGCTGAGTATGCGATTGTTGCGTTGGGGATTATGGCGGCCGGCGCAGTGTTTTCCAGTGCAAATCCGGCAGCTCATGCTTCCGAAATCAACCAGCAGGCTCAGTCTGCCGATGCGAAGCTCATTGTCACAAATGGACTCAACTATGGAAAGGTGAAAGGTGTAGGCCTACCAGTGATAGTGCTAGACGACGAACCCATCGAAGACACCATGAACTGGAGGAAGCTTCTAGAAGCAGCAGACCGAGCCGGCGGCCAGACCGGTCCCAAAGAGCCCATCTCACAGAACGACCTCTGTGCCATGCCTTTCTCATCGGGAACCACCGGTCTCTCAAAGGGCGTCATGCTAACTCACCGTAACCTCGTCGCCAACCTCTGCTCCACCCTCTTCGGCGTCGAGCCAGAAATGGTGGGTAAGGTCACCACCCTAGGGTTGCTACCTTTCTTCCATATCTACGGCATTGCCGGAATCTGCTGCGCCACGCTCAGGAACAAAGGCACGGTGGTGGTTATGGGCCGGTTCGAGCTTAGGACTTTTTTGAATGCTTTGATCGCTCATGAGGTTACTTTCGCTCCCATTGTTCCCCCCATCATTCTGAACTTGGTTAAGAATCCGGTTGTTGATGAGTTTGATCTCTCCAAGCTAAAGCTTCAGGCGGTTCTCACCGCCGCCGCTCCTCTTGCTCCGGAAGTTCTCACGGCGTTTGAGAAAAAGTTCCCTTGGGTTCTTGTCCAACAAGCTTATGGTCTAACAGAACATAGCTGCATCACACTGACTAATGCACACAGAGGATTAGCGCATTCGAAAAGGAACTCGGTGGGTTTCATCCTCCCTAATTTGGAAGTGAAGTTCATTGATCCTGACACCGGCAAGTCCCTCCCCAGAAACACGTCCGGCGAGCTCTGTGTCAGAAGCCAAGCCGTCATGCAAGGTTACTACAAGAGGGTAGACGAGACAGCACAGACAATTGATAAGAATGGGTGGCTTCACACAGGAGACATAGGTTTCATTGATGACGACGACAATGTGTTTATTGTGGATCGTATCAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCTCCCGCAGAGCTAGAGGCCATTCTTCTTACTCATCCCTCAGTTGAAGATGCTGCCGTCGTCCCAATAGGAGATGAAGAAGCGGGAGAGATCCCTGGAGCAAGTGTAGTGATGAGTGCAAGTGCAAAAGAGAGTGAAGAAGACATGATCGAGTACGTTGCCTCCAACGTTGCAAGTTACAAGAAAGTGAGAGTGCTTCATTTTGTGGACGCCATTCCTAAATCTCCTTCTGGCAAAATCATGAGGAGGCTTGTTAGAGACAAAATGCTCCAACATATCAAGCCTTCTATCTCAAAATCTGCCTAG 1656 0.5133 MRSFTEMQIPEEFIFRSPHSGVVPVPDNVTLPEFVLQNSELYADKVAFVEVGSGKAITHGQVARDTERFAKALRSLGVRKGHVVIAVLPNVAEYAIVALGIMAAGAVFSSANPAAHASEINQQAQSADAKLIVTNGLNYGKVKGVGLPVIVLDDEPIEDTMNWRKLLEAADRAGGQTGPKEPISQNDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMVGKVTTLGLLPFFHIYGIAGICCATLRNKGTVVVMGRFELRTFLNALIAHEVTFAPIVPPIILNLVKNPVVDEFDLSKLKLQAVLTAAAPLAPEVLTAFEKKFPWVLVQQAYGLTEHSCITLTNAHRGLAHSKRNSVGFILPNLEVKFIDPDTGKSLPRNTSGELCVRSQAVMQGYYKRVDETAQTIDKNGWLHTGDIGFIDDDDNVFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPIGDEEAGEIPGASVVMSASAKESEEDMIEYVASNVASYKKVRVLHFVDAIPKSPSGKIMRRLVRDKMLQHIKPSISKSA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1033 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 538 - -
Acco05g1033 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 19 440 - -
Acco05g1033 551 SUPERFAMILY Acetyl-CoA synthetase-like 25 544 - -
Acco05g1033 551 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Acco05g1033 551 Pfam AMP-binding enzyme 39 445 IPR000873 -
Acco05g1033 551 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Acco05g1033 551 Gene3D - 441 543 IPR045851 -
Acco05g1033 551 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Acco05g1033 551 CDD 4CL 25 533 - -
Acco05g1033 551 Gene3D - 13 440 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1033 Acco-ChrAcco05 21484019 21488627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1033 5 540 Monolignol Biosynthesis Gene Families AT1G62940 70.818 0.0 765