Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1032 ATGGCGGACTCGGATAACGATTCCGGAGGTACTCAGAACGCGGCGAATGCGAACAGCAGCGAACATTCGCTGCGAGAGCAAGACCGGTTTCTACCAATCGCGAATGTGAGCAGGATCATGAAGAAGGCTCTTCCAGCTAATGCGAAGATCTCAAAGGACGCTAAGGAGACAGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATCACAGGCGAGGCCTCCGACAAGTGCCAGAGAGAGAAGCGGAAGACAATCAATGGTGACGATTTGCTGTGGGCAATGACGACGTTAGGATTTGAAGACTACGTGGACCAGCTCAAGATATATCTCCAGAGATTCAGGGAAATGGAAGGCGACAAGAGCGTGGCGGCGCGTGACAAGGACGGCGGTATTGGAGGCGTGAACACTGCCAACAGTGGCTTCGAGGGCGGAGTAGGTGGTGGAGTGTATGGTGGTGTGGGAATGATGATGCATCAGGGACACGTGTACGGCTCTGGAAGGTTTCATCCAATGGCTGTAAGTGGAGGAAGTGGTGGTCCTGTGATGGGTAAGAGTGGGCCCAGTTATCCCAGTGCCGGATCTAATGCAGGTAGGCCCAGATAG 603 0.534 MADSDNDSGGTQNAANANSSEHSLREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDQLKIYLQRFREMEGDKSVAARDKDGGIGGVNTANSGFEGGVGGGVYGGVGMMMHQGHVYGSGRFHPMAVSGGSGGPVMGKSGPSYPSAGSNAGRPR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1032 200 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 125 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco05g1032 200 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g1032 200 FunFam Nuclear transcription factor Y subunit B-3 19 140 - -
Acco05g1032 200 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco05g1032 200 SUPERFAMILY Histone-fold 27 127 IPR009072 GO:0046982
Acco05g1032 200 MobiDBLite consensus disorder prediction 1 27 - -
Acco05g1032 200 MobiDBLite consensus disorder prediction 175 200 - -
Acco05g1032 200 Gene3D Histone, subunit A 17 136 IPR009072 GO:0046982
Acco05g1032 200 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Acco05g1032 200 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Acco05g1032 200 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Acco05g1032 200 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1032 Acco-ChrAcco05 21451404 21452006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1032 1 124 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.065 3.87e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco05g1032 CBFD_NFYB_HMF 1.9e-27 CL0012