Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1025 ATGGTTCTTACACGGAGGACAACCAATGCAGACTTGGAGGCAGCAGATATTGATCATGATGGAAGTGTTGGGGTTGCTGAGTTCATTATCTATAAGCTCAAAGAGATGGGGAAAATAAATCAAGAAGATATCGCACTCGTACTGCGAGAGTTTGAGGAGATTGATTTTGATCAATCTGGTACTCTTTCACCTTCTGATATAACTCTTTCTCAGGCACCTACTCCATCTTAG 231 0.4156 MVLTRRTTNADLEAADIDHDGSVGVAEFIIYKLKEMGKINQEDIALVLREFEEIDFDQSGTLSPSDITLSQAPTPS 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1025 76 ProSitePatterns EF-hand calcium-binding domain. 55 67 IPR018247 -
Acco05g1025 76 SUPERFAMILY EF-hand 12 67 IPR011992 -
Acco05g1025 76 ProSitePatterns EF-hand calcium-binding domain. 16 28 IPR018247 -
Acco05g1025 76 Gene3D - 3 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1025 Acco-ChrAcco05 21322971 21324071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1025 2 71 Ion Channels AT5G55630 67.143 1.68e-28 102