Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0969 ATGCAGGCATCTCAGAAACATGAGATTTTCTATGGCTCTGTGCAAACTCTGGAATCATATCATTCCTCTTTAGCTCAAACCATAGAATCTTGCTCAACATGTAACAGTAATCCTGGCCTTAGTTCTCCATCAGCTAATGGAAGCCCAGTATTAAACTCATACATGTTGAAGACACAAAATTCTTTTGAATCTTGCTTGACACAGACACAAGATATTGATGATCTTAGCCACAAGCTACACGAGCTGGAGACCGTGATGTTGGGACCTGATGAAGAAATTTCAGTCACATATGATGCTGATGCAGTCATGAATGAAGCAGAGAGATGGAAGAAGACAATAGAGATGATATCTAGAGGAGACTTGAAAGAGATGCTTTGTGCTTGTGCACATGCAATGGAGGAGAATGATATGGAGACGAGCGAATGGCTGATATCTGAGCTGCGAGGAATGGTGTCAATTTCTGGAAATCCTCTACAGCGTTTAGGTGCATATGCGTTAGAGGCTCTTGTGGCTAGATTGTCTTCTTCAGGAAGCAAAATATGCAAATCCTTAAAATGCAAAGAACCTACTGCTTCTGAACTCCTTTCTTATATGAATAAATTATATGAAATATGCCCATACTTCAAATTTGGCTATTTCTCAGCAAATGGGGTGATTGCTGAAGCCATGAAGCAAGAGAATAAGGTTCATATAATTGATTTTCAGATTAATCAGGGCATCCAGTGGGTGAGTCTCATTCGAGCTCTTGCCTGCCGACCAGGAGGGCCCCCAAAGATTAGAATCACAGGTGTTGATGACTCCACTTCGGCTTTTACTAGAGGAGGAGGACTTGAGATTGTGGGGAAAAGATTATCAGCACTTGCACAGTCATGTAACGTCCCATTTCAGTTCCTTGCTGTGGAAGTTTCTGCATCGGATGTCGATTTCCAACACCTTAAGATTCTACCTGGTGAAGCCATTGCTGTGAACTTCACCATGATGCTACACCATCTTCAAGATGAGACCATAGAACGTTTGCTGAGATTGGTTAATTGCTTGTGCCCCAAGGTAGTGACCCTTGTTGAGCAAGAAAGTGAAACCAATCATGTCCCGTTCTACCCGCGTTTTGTTCAGACACTTAACTACTACTTGCCGGTTTTTGAATCAATTGATGATGTCATGGCAAGGGATCACAGGGATCGGATCAACGTGGAACAACATTGTTTGGCTCGAGAGATTGTGAACTTGATAGCCTGTGTAGGGGAAGATAGAGTGGAACGACACGAGACTTTGGAAACTTGGAGATCACGTTTCAGAATGGCGGGGTTTGGCCCATATCCATTGAGCTCATTCATTAATTTTACCATCAAGGATCTTCTGGAGGATTATTCCAAAAACTACACTCTACAAGAGAAAGATGGTGCTCTATACCTTGGTTGGATGAATCAACCTCTTGTTTCCTCTTGTGCATGGAGATGA 1458 0.4252 MQASQKHEIFYGSVQTLESYHSSLAQTIESCSTCNSNPGLSSPSANGSPVLNSYMLKTQNSFESCLTQTQDIDDLSHKLHELETVMLGPDEEISVTYDADAVMNEAERWKKTIEMISRGDLKEMLCACAHAMEENDMETSEWLISELRGMVSISGNPLQRLGAYALEALVARLSSSGSKICKSLKCKEPTASELLSYMNKLYEICPYFKFGYFSANGVIAEAMKQENKVHIIDFQINQGIQWVSLIRALACRPGGPPKIRITGVDDSTSAFTRGGGLEIVGKRLSALAQSCNVPFQFLAVEVSASDVDFQHLKILPGEAIAVNFTMMLHHLQDETIERLLRLVNCLCPKVVTLVEQESETNHVPFYPRFVQTLNYYLPVFESIDDVMARDHRDRINVEQHCLAREIVNLIACVGEDRVERHETLETWRSRFRMAGFGPYPLSSFINFTIKDLLEDYSKNYTLQEKDGALYLGWMNQPLVSSCAWR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0969 485 Pfam GRAS domain family 122 485 IPR005202 -
Acco05g0969 485 ProSiteProfiles GRAS family profile. 112 485 IPR005202 -
Acco05g0969 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 83 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0969 Acco-ChrAcco05 19100330 19101787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0969 64 485 GRAS Transcription Factor Family AT1G50600 60.277 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco05g0969 GRAS 2.1e-124 CL0063