Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0965 ATGGAGGCTACTAGCCACTCGGAATCGCAGCTCCAGCTTTTGGATTCCGATGATGTAGCATTTAACGATCTGAATCAGCTCGGCTTGCGGCAGAATTCGGACGTCGGAGTATCTGCCTCTGGAAGTGGAGGTGCCAGGTACAAGCTGATGTCGCCAGCGAAGCTTCCGATCTCGAGGTCGCCCTGTATTACGATACCTCCCGGGCTGAGTCCGACGTCGTTTCTGGAGTCCCCGGTCCTCCTGTCCAACATGAAGGTGGAGCCCTCGCCAACAACAGGGTCCCTCACTAAGCCTCAAGCAGTGTTTAGTTCTGTTGCTTCCGCAGCATTTCCTGTGACAACTGTATCCTCAAATACCAATACTGTTGATGACAGAAAATCTGACTTCTTTGAGTTTAAACCATGCAGTACCACAAGTATGGTTCCTGCTGATTTTACCAACCATGTGATAAGTGAACAATCCAGGCAAATAGATGGTCCAGGGCTTGTTCAATCATATGGCTCATCAACATTAGTTAAGACTGAGACAGCAGTGCCATCAAATAAATTGTGTCTATCATCAACTGTTCAAATGGTTAGTTCAGGTGCTAGTGCTCCTACTGAAGTTGATCCAGATAAACTTAACCAGAAAGGCAATGCTGCCCCTGGGCTTCAAGCATCTTTAGCTGATGGTAGAGGCAATGGCCTTCCAGTTGCAGCTGAGAGAATATCAGATGATGGATACAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGATGTGAATTTCCGCGCAGCTACTACAAGTGCACACACCCAAACTGTGAAGTAAAAAAGTTATTTGAACGCTCTCATGATGGGCAAATAATAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTGCTGGTACTATGATGTCTATACAAGAAGAGATAACTGACAAAGCTTTGTCAGCCAACCAAGATGACAAATCATCCAATATGCATGCACTGGTGCCTCACAATATTGCTGAACCCAACAGTAACCCAGATCAATCTCCCATACCTGCGGATAGTCCAGAGGGTGTTGGGTTAGCGTCAAATAGGGTTAATGATGAGGTTGATGATGATGATGATCCCTTCTCAAAGAGAAGCAAAATGGACACTGGAATTGCTGACATTACTCCTATAGTTAAGCCAATCCGGGAGCCACGGGTTGTTGTACAAACACTAAGTGAGGTTGACATATTGGATGATGGTTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGTCGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATAACCACCTACGAGGGCAAACACAATCATGACGTGCCTACTGCGAGGAGCACTAGCCATGACACAGCAGGACCATCAGTTGCTGCTGGAGGGCAGATAAGAAATAGACCTGAAGAAAGTGATAATATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATACCAAACAGACAAGGCCAATTGCTGCTCTCTGAATTTGGTAACAGCCAAACGCACCCTAGCAATTCCAGTATCAAATTTGTTCATAACACCCCTCCTCCAGCATACTTCAGTGTTCTTAACAACAGCTCGAATCTGTATGGTTCTAGAGAAAATCTGATGTTAGCAGGAAGAAACAGAAATAAAATCTGGGTACAAGTTTGTTTCCATCTTTTCGGCTGGTAA 1773 0.4518 MEATSHSESQLQLLDSDDVAFNDLNQLGLRQNSDVGVSASGSGGARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLTKPQAVFSSVASAAFPVTTVSSNTNTVDDRKSDFFEFKPCSTTSMVPADFTNHVISEQSRQIDGPGLVQSYGSSTLVKTETAVPSNKLCLSSTVQMVSSGASAPTEVDPDKLNQKGNAAPGLQASLADGRGNGLPVAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQIIEIIYKGKHDHPKPQPSRRYSAGTMMSIQEEITDKALSANQDDKSSNMHALVPHNIAEPNSNPDQSPIPADSPEGVGLASNRVNDEVDDDDDPFSKRSKMDTGIADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPSVAAGGQIRNRPEESDNISLDLGMGIRSAAENIPNRQGQLLLSEFGNSQTHPSNSSIKFVHNTPPPAYFSVLNNSSNLYGSRENLMLAGRNRNKIWVQVCFHLFGW 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0965 590 MobiDBLite consensus disorder prediction 468 497 - -
Acco05g0965 590 Gene3D WRKY domain 399 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 MobiDBLite consensus disorder prediction 336 382 - -
Acco05g0965 590 SUPERFAMILY WRKY DNA-binding domain 404 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 502 IPR044810 GO:0003700
Acco05g0965 590 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 Pfam WRKY DNA -binding domain 413 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 ProSiteProfiles WRKY domain profile. 407 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 FunFam WRKY transcription factor 33 399 465 - -
Acco05g0965 590 Gene3D WRKY domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 SUPERFAMILY WRKY DNA-binding domain 235 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 SMART WRKY_cls 412 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0965 590 FunFam WRKY transcription factor 229 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0965 Acco-ChrAcco05 19057986 19063996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0965 50 567 WRKY Transcription Factor Family AT4G26640 55.000 3.99e-172 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g0965 WRKY 3.4e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0965 05 19057986 19063996 Acco05g0965 05 19057986 19063996 ECH