Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0959 ATGGAGAAAACCCAAGCTTGCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCTCTTTTTCACAGTTTGTGCAGGTGAGTTCTCAGAATCTAAATCTTTCTTCGGTTTCACCAGAGCCATTGATTCCCAAAATGAACTTAACATGAACAAAGTTGGCCAATTGTCATTCCATCCATGCTTATTGCTTGAGCTCAAAGGTATCATAAGGTGCAACTCAGAAGCTTCCACCATCAATGAAAGAAGCCTTCAAAGTAAGAATCTCCGCGGCAAAATCAATGCAGATTCCTTATGTAGGCTTCAGAATCTGGAAAGTGTTGACTTACCTAAGAATCACATCAGAGGAAACATTCCTGACTCAGTTGTGCACTGCACAAGGTTGGCGTATTCAAATCCAAGCAGAAACAAGTTGAGTGGGAGGCTACCTACTAAAGCCTTGACAAAATTGAGATATTTGAGAACACTGGACATCTCTAACAATGATGTCTCTGAGGATTATTTTAAAAGTGAAGGGTTAAAGTTAAGGAAACTGATGGAAGTTGCATCATCAGATCAACCAAGTTCTTCTCCTTCCAGCAACCAAAATTCGACAAAACTCGCCATAATACTTGGTGGTGTTGTATTGTTATTGTTGGCTTTGTTCTTTCTGGTGAAGAAGGGGCCTAAGTTAGGTGAAGAGATGGAGAAGATAGAAACCCATAAAGAGTTTTCGGGGGAGACGCCAAAAGGGGACATGATTACTACAGAAGATGTTGTGAAGCTGAAGACGAGAGATTCAGAGCTTGTTTTCTTTGTTGAAGACCATGAGAGGTTCACACTTGAGGACTTGCTTCAAGCCACAGCTGATGTAAGAAGTGAGAGCTTTAGCAGCAGCTTGTATAAGGTAATACTGAAGAATAATATGCGTTATGCAGTGAAAAGGCTAAGGAATTTGCAGGTAACTTCTGATGAATTTGGAGAAACATTAAGGCAAATAAGTAACCTGAAACATCCAAATATTCTTCCTCTTGTTGGCTACCGATCGACTAGTGAAGAAAAACTTCTGATTTATAAATATCAAAGCAATGGAAGCCTGCTTTTCCTTCTAAAAGAATACTTGCAAGGTAAAAAAGAATTCCCATGGAAACTGAGACTATCCATAGCAGCTGGAATTGCAAGGGGTTTAGGGTTCATGCATCAGAAGATAGAAGGAAGAGAAATAATTCCTCATGGAAACCTCAAGCTGTCAAATATCCTTCTTAATGACAACAATGAGCCTCTTATAAGTGAGCATGGACTATCAAAATTGCTAGACCCTAACAGATCATTCTTCTTTTCTTCTCAAGGATACACCGCCCCCGAAAACAGTTTAACCGAGAAAAGTGATGTTTATAGCTTTGGAGTGATCCTACTCGAGCTACTAACAGGAAAGAGTGTGGAAATAAACAACATAGACCTACCTAGATGGGTCCAATCCATGGTGAGAGAGGAATGGACAGGGGAGGTGTTTGATAAGGCGGTTATGGAAAGCGAGCATCAGTGGGTGTTTCCTGTGCTGAACATCGCCCTTTTGTGTGTGTCACGTGTCCCCAAGAACCGACCAACCATGGGAGAAGTATTGGAGAATACAGATAAAGTCTTGCAGGAGTATGAACATGTTCAGATGCTGCAGCATGAACATCATCCAACAACATTTTACAACAATAATGGAAGCCATGACGTTTGTTGTTCATTGCACAATATCATACCAGAGACTTGGGATTCTCCTGGATCTAATTACTGA 1761 0.4072 MEKTQACLLLLLLLLPPHLFFTVCAGEFSESKSFFGFTRAIDSQNELNMNKVGQLSFHPCLLLELKGIIRCNSEASTINERSLQSKNLRGKINADSLCRLQNLESVDLPKNHIRGNIPDSVVHCTRLAYSNPSRNKLSGRLPTKALTKLRYLRTLDISNNDVSEDYFKSEGLKLRKLMEVASSDQPSSSPSSNQNSTKLAIILGGVVLLLLALFFLVKKGPKLGEEMEKIETHKEFSGETPKGDMITTEDVVKLKTRDSELVFFVEDHERFTLEDLLQATADVRSESFSSSLYKVILKNNMRYAVKRLRNLQVTSDEFGETLRQISNLKHPNILPLVGYRSTSEEKLLIYKYQSNGSLLFLLKEYLQGKKEFPWKLRLSIAAGIARGLGFMHQKIEGREIIPHGNLKLSNILLNDNNEPLISEHGLSKLLDPNRSFFFSSQGYTAPENSLTEKSDVYSFGVILLELLTGKSVEINNIDLPRWVQSMVREEWTGEVFDKAVMESEHQWVFPVLNIALLCVSRVPKNRPTMGEVLENTDKVLQEYEHVQMLQHEHHPTTFYNNNGSHDVCCSLHNIIPETWDSPGSNY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0959 586 Gene3D Ribonuclease Inhibitor 30 200 IPR032675 -
Acco05g0959 586 Pfam Protein tyrosine and serine/threonine kinase 298 534 IPR001245 GO:0004672|GO:0006468
Acco05g0959 586 SUPERFAMILY Protein kinase-like (PK-like) 290 534 IPR011009 -
Acco05g0959 586 PANTHER OS05G0588300 PROTEIN 8 163 - -
Acco05g0959 586 SUPERFAMILY L domain-like 85 177 - -
Acco05g0959 586 Gene3D Transferase(Phosphotransferase) domain 1 354 564 - -
Acco05g0959 586 Gene3D Phosphorylase Kinase; domain 1 245 352 - -
Acco05g0959 586 ProSiteProfiles Protein kinase domain profile. 277 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0959 Acco-ChrAcco05 18956427 18959654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0959 7 542 Receptor kinase-like Gene Family AT5G53320 29.461 4.00e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco05g0959 PK_Tyr_Ser-Thr 3.5e-25 CL0016