Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0921 ATGCAGCACCCAAAAGTCCAAGACCAGATCCTGGTTTCTCTTCGTCTGAGTTATCCAGATCTGTTGGTTCAGATCATGAGAAAAGGCAGAGCAGCCCCGCCGGTGAAGACGACAGCCGAGGCGGCGGCTGGGATCGACGGAGGATCCGGATCGAGGACGGTTTTAAAAGAGCCGAGGTTCCGGGGCGTGAGGAAGAGGCCGTGGGGTAGATTTGCGGCGGAGATCAGAGACCCTGTGAAGAAAGCTCGTGTGTGGCTTGGCACCTTCGATTCCGCTGAAGAAGCCGCTCGAGCTTATGACGCTGCCGCTCTCAACCTCCGTGGCCCTAGGGCTAAGACTAACTTTCCGATCAACCCTTCTTCTCTCTCACCCTTTTGTTACCATCACAACAATAACAACCCCACCGATCCGTTTTTAGATCACAGGTTGTATGCTTCTAATGGCTTCCAGGAGCACCAAATCAATCCTCAGAGACCTACTTCTAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGCGGTCCTCGCCCTCGGTCGATTGCGCCGCCGTTGACCACCACCAACACCTCCCGGAGATACCCTCGGACACCGCCCGTTGTTCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCTTCTGTGGTTGATAACGACGGCGATGATATCGCCTCCTCCTCTTTCCGGCGGCCTTTCCCCTTCGATCTAAACCTCCCACCGGTCGATGACGATCTTCACTGCACTGATCTGCGTCTCTGA 753 0.5578 MQHPKVQDQILVSLRLSYPDLLVQIMRKGRAAPPVKTTAEAAAGIDGGSGSRTVLKEPRFRGVRKRPWGRFAAEIRDPVKKARVWLGTFDSAEEAARAYDAAALNLRGPRAKTNFPINPSSLSPFCYHHNNNNPTDPFLDHRLYASNGFQEHQINPQRPTSSGMSSTVESFSGPRPRSIAPPLTTTNTSRRYPRTPPVVPEDCHSDCDSSSSVVDNDGDDIASSSFRRPFPFDLNLPPVDDDLHCTDLRL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0921 250 Pfam AP2 domain 58 108 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 MobiDBLite consensus disorder prediction 152 193 - -
Acco05g0921 250 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 MobiDBLite consensus disorder prediction 152 231 - -
Acco05g0921 250 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 Gene3D AP2/ERF domain 59 118 IPR036955 GO:0003700|GO:0006355
Acco05g0921 250 CDD AP2 58 118 IPR001471 GO:0003700|GO:0006355
Acco05g0921 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 42 217 - -
Acco05g0921 250 MobiDBLite consensus disorder prediction 205 219 - -
Acco05g0921 250 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Acco05g0921 250 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0921 Acco-ChrAcco05 18068232 18069771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0921 26 250 AP2-EREBP Transcription Factor Family AT3G20310 58.103 9.43e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco05g0921 AP2 7e-16 CL0081