Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0896 ATGGTTCGCAATTGCTATATGCATCTCATTTTTATTGTCTTCTCGGCAATTTTGACTTCCCGGGGTTCTGCAATTACTGATCCGGCTAATGTCGCAGCTTTGCGAGATCTATACGAGACGTTGAACCGGCCACCGGAGTTGAAGAACTGGAATCTTGAAGATCCCTGTGGGGAATCTTGGACTGGAGTAGCATGTTCTGGGTCGTCAGTCATACACCTAAAAATTCTAGGATTGAATCTCACAGGGCATCTTGGAAGCCAGCTCCATAATCTACAAAAATTGAAGATGTTTGATGTCAACTCCAATAACATAGGTGGGGAAATACCATCCAGCTTACCCCCGAATGCCACACATATGTTCTTGCAAAATAATAACTTCACTGGATCAGTCGCATATCTGGCTGACCTCCCCATTACAGATTTGAATATTCAAGGTGATAATCTATTTAGCGGCATTCTTCCGTGGCATTTTCAATTCATACCAAATCTATGGCGATTGCCTTCCCTGCGCCAATACAGAGCAGAGGACATGCCAAGAAGAAGATTTTCCACAACACGCAGATTCTCTGGAAGGGTAAAAGTTTACTCCGTGGGAGAGCTTCAGGTGGCTACAGACAGCTTCAGTGAAGACAATTTTCTGGGAGAGGGATCAATGGGTTCTGCTTACAGAGCTGTGTTTCCAAATGGCCGAACTTTGGCTGTGAAGCACATCAACATGACGGGCCTGTCTTTACCCGAAGAGGAAACCTTTTTGGATGCCGTTTCCATCGCTTCCCGTCTGAGGCATCCCAACATCATTGCGCTTAATGGCTATTGTATGGAGCACGGTCAGCGTCTTCTTGTTTACGATTATGTTAGAAACTTAACTCTGCACGATGCTCTTCACAGTGACGCATTCCCGCCTTTATCTTGGGCCCTCCGTCTCCGTATTGCCCTTGGTGTTGCTCAGGCTCTGGATTATTTGCACTCGACGTTCTCCCCTCCTGTAGCACACGGCAAATTGACCGCTGCCAATATCCTTCTCGACGAAAACATGATGCCTCGTGTCTGTGACTCTGGCCTGTCTATTTTGAGACCGCTAATGAGCTACATAGTCAAAGGTTCTCGACTTGCAGCTGAAGACGCAGGCTACATTGCACCGGACCACGGCCAAGCAAGAATTAGCAACCCAAAGAATGACGTTTATGCCTTTGGGGTGTTACTTCTGGAATTATTAACGGGAAGGACACCTTACGACGAGTATGTTCTTCTGCAGAGTTCGAGGCCATGGGCGGAAAAATACCTGGGAAGATGGGCATCATCGAGGCTTCATGACAATGAGAGCTTGGAACAGATGGTGGATCCAGGAATTAAAGGAAGTGTTTCAGCCAAAGCCCTCTCTCGTTATGCTTATATCGTCTCGCTCTGCATACAGCCCGTGAAGGAATTTCGACCAATAATGTCGGCGGTGGTGGACTCTCTTAAAATCTGTTCACAAAAGCTTACCATGGACAAACCCACCGCCACCAGTGGAAAAATTACTGACTTGGATCCACTTGACAGCTTAAGCATGATCATCCTCATAATTAGAACCAAGTTTCTGGACGATTCACATCTGCGTATTCCAACTGTGCAAAATGCCACTGCACCTAAGCATAATCTTCATAAAAGTTCTATGCCACAACCTGTGGAAGAGCCAGATTTCAGTATAATTAGCTCTGGTCTTACAAGACAGCAAGCATAG 1722 0.4617 MVRNCYMHLIFIVFSAILTSRGSAITDPANVAALRDLYETLNRPPELKNWNLEDPCGESWTGVACSGSSVIHLKILGLNLTGHLGSQLHNLQKLKMFDVNSNNIGGEIPSSLPPNATHMFLQNNNFTGSVAYLADLPITDLNIQGDNLFSGILPWHFQFIPNLWRLPSLRQYRAEDMPRRRFSTTRRFSGRVKVYSVGELQVATDSFSEDNFLGEGSMGSAYRAVFPNGRTLAVKHINMTGLSLPEEETFLDAVSIASRLRHPNIIALNGYCMEHGQRLLVYDYVRNLTLHDALHSDAFPPLSWALRLRIALGVAQALDYLHSTFSPPVAHGKLTAANILLDENMMPRVCDSGLSILRPLMSYIVKGSRLAAEDAGYIAPDHGQARISNPKNDVYAFGVLLLELLTGRTPYDEYVLLQSSRPWAEKYLGRWASSRLHDNESLEQMVDPGIKGSVSAKALSRYAYIVSLCIQPVKEFRPIMSAVVDSLKICSQKLTMDKPTATSGKITDLDPLDSLSMIILIIRTKFLDDSHLRIPTVQNATAPKHNLHKSSMPQPVEEPDFSIISSGLTRQQA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0896 573 Gene3D Transferase(Phosphotransferase) domain 1 286 507 - -
Acco05g0896 573 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 166 IPR046959 -
Acco05g0896 573 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Acco05g0896 573 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Acco05g0896 573 Gene3D Phosphorylase Kinase; domain 1 170 284 - -
Acco05g0896 573 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 173 284 - -
Acco05g0896 573 Pfam Protein tyrosine and serine/threonine kinase 211 485 IPR001245 GO:0004672|GO:0006468
Acco05g0896 573 SUPERFAMILY Protein kinase-like (PK-like) 182 488 IPR011009 -
Acco05g0896 573 ProSiteProfiles Protein kinase domain profile. 207 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0896 573 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Acco05g0896 573 FunFam Leucine-rich repeat receptor-like protein kinase 285 498 - -
Acco05g0896 573 SUPERFAMILY L domain-like 44 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0896 Acco-ChrAcco05 17401253 17406454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0896 161 527 Strubbelig Receptor Gene Family AT5G06820 49.593 1.38e-108 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco05g0896 PK_Tyr_Ser-Thr 1.9e-31 CL0016