Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0894 ATGCCATGTGGTTGGGGAAGAGTAGGTTCGGGTTTGGCCTATCAGTTGACGTTTATTGACCCATTGATTGTATCGGCAATGCCGAGAACCACCGCGAGGGCCGTTGGGGCGTCCTTGACGTTTATTAAGTCACTGTCGCTTTCGGCCAGGAGTCAGCAGGAACACTCTTCGGCTAAGAAGCTGAGTTCTTACCTTGTTCAGACACAATTTCAGTGTGGCTCACAAGTTCCAGGTCCTCGTTCATATTGCACTGCAAATGTTGTTGATGTTGGACAGCCAACTCCTGCATCTCATCCGCAGTTACTGAAAGATGGAGAGATCACACCTGGCATAACTAAAGAGGAATACATCCTAAGGAGAAAAAAGTTGTTGCAGTTTCTCCCTGAGAAGAGTTTGGCCATCATTTCAGCTGCCCCTGTAAAGATGATGACAGATGTTGTGCCTTATACCTTTAGGCAAGATGCTGACTATTTATATATCACAGGCTGCCAACAACCAGGCGGTGTGGCAGTTTTAGGTCATGAGTGTGGTCTATGCTTGTTCATGCCTGAAGCTAAGACTCATGATGTAATTTGGCAAGGGCAAGTAGCTGGAGTTGATGCAGCACTAGATACGTTCAAGGCTGACGTGGCATATCCCATGAGGAAATTGCATGAGATTCTTCCAGATATGTTAAGAGGATCCTCAAAATTGTTTCACAATGTTCAGACTGCAATTCCAGCATATACGAAACTGGAAGCCTTCCAAAAGCTATTATTTTCTAACAATGTAGAGGATCTGTCTATTTATACCCATCAGTTACGGTGGATAAAGTCACCTGCAGAGATCAAGTTAATGAAGGAATCCGCATCAATTGCATGCCAGGCTCTTCGGTTGACAATGTTGCACTCAAAGATGTACCCTTTTGAAAGTATGCTGGCTGCAAAGGTTGAATATGAATGCAAAATGAGAGGTGCTCAGCGAATGGGGTTCAATCCTGTGGTTGGTGGTGGACCTAATGGAAGTGTTATACATTATTCTAGGAATGATCAAAAAATTGAAGATGGTGATCTTGTTTTGATGGATGTTGGTTGTGAGTTGCATGGATATACCAGTGATCTTACCCGAACTTGGCCACCTTGTGGTAGCTTTTCTTCTGCCAAGGAAGAGCTTTATGAGCTTATATTGGAAACAAACAAGCAGTGTGTGGAACTTTGTAAACCTGGTGCTAGCATTCAGCAAATACACAATCATTCGGTTGAAATGCTCCAGAAAGGACTCAAGGAGATTGGAGTTTTGAGAGGGGTTCCAAGCCGTGCCTACCATACACTGAACCCTACTTCTATAGGTCACTACTTAGGAATGGATATTCATGATTGTTCAAGGATTAACTATGACTGTCCTCTGAAGCCAGGTGTTGTCATAACTATTGAACCAGGAGTATACATCCCATCTTATTTTGATGGTCCCGAGAGGTATCGAGGCATTGGGATAAGAATTGAGGATGAGGTTCTCATCACGGAAACAGGTTATGAGGTTCTTACAGCGTCAATTTCCAAGGAAATCAAGCACATTGAATCTCTGTTAAATAACTGCCATGGAATGGGAAAGGATAGCCACAGTAAGATGGGAGCTACAGTGAGTTAA 1626 0.4354 MPCGWGRVGSGLAYQLTFIDPLIVSAMPRTTARAVGASLTFIKSLSLSARSQQEHSSAKKLSSYLVQTQFQCGSQVPGPRSYCTANVVDVGQPTPASHPQLLKDGEITPGITKEEYILRRKKLLQFLPEKSLAIISAAPVKMMTDVVPYTFRQDADYLYITGCQQPGGVAVLGHECGLCLFMPEAKTHDVIWQGQVAGVDAALDTFKADVAYPMRKLHEILPDMLRGSSKLFHNVQTAIPAYTKLEAFQKLLFSNNVEDLSIYTHQLRWIKSPAEIKLMKESASIACQALRLTMLHSKMYPFESMLAAKVEYECKMRGAQRMGFNPVVGGGPNGSVIHYSRNDQKIEDGDLVLMDVGCELHGYTSDLTRTWPPCGSFSSAKEELYELILETNKQCVELCKPGASIQQIHNHSVEMLQKGLKEIGVLRGVPSRAYHTLNPTSIGHYLGMDIHDCSRINYDCPLKPGVVITIEPGVYIPSYFDGPERYRGIGIRIEDEVLITETGYEVLTASISKEIKHIESLLNNCHGMGKDSHSKMGATVS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0894 541 CDD Prolidase 276 509 - -
Acco05g0894 541 PRINTS Methionine aminopeptidase-1 signature 350 366 IPR001714 -
Acco05g0894 541 PRINTS Methionine aminopeptidase-1 signature 460 472 IPR001714 -
Acco05g0894 541 SMART AMP_N_2 111 240 IPR007865 GO:0030145|GO:0070006
Acco05g0894 541 Gene3D Creatinase/methionine aminopeptidase superfamily 270 534 IPR036005 -
Acco05g0894 541 FunFam Xaa-Pro aminopeptidase 3 270 527 - -
Acco05g0894 541 SUPERFAMILY Creatinase/prolidase N-terminal domain 109 271 IPR029149 -
Acco05g0894 541 Pfam Aminopeptidase P, N-terminal domain 116 230 IPR007865 GO:0030145|GO:0070006
Acco05g0894 541 SUPERFAMILY Creatinase/aminopeptidase 272 523 IPR036005 -
Acco05g0894 541 Gene3D - 110 268 IPR029149 -
Acco05g0894 541 Pfam Metallopeptidase family M24 278 501 IPR000994 -
Acco05g0894 541 PANTHER XAA-PRO AMINOPEPTIDASE 3 89 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0894 Acco-ChrAcco05 17310326 17325597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0894 6 73 Antiporters AT5G64290 57.353 7.80e-14 72.4