Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0878 ATGACTACCAATAATACGGAGGAGGCAAAACATGAAGGCGAGGAGACACTTGTTGGGGTGACCGGTGAAAGGGGAGGAGGCGCGGCGGCATCTGAGGAGATAGTTCTGAAGAAAGGACCGTGGACGGCGGTGGAGGACGCGGTTCTGATAGAGTACGTGACGAAGCATGGAGAAGGGAACTGGAATGCAGTGCAGAAAAATACAGGACTAGCTCGCTGTGGCAAGAGTTGTAGGCTGAGATGGGCAAACCATTTGCGACCCAATTTGAAAAAAGGTGCCTTTTCTCCTGAGGAAGAGAAGCTCATCCTGGAGCTTCATGCACAATATGGTAACAAATGGGCCCGCATGGCTTCTCTGTTACCAGGACGTACGGACAATGAAATCAAGAATTATTGGAACACAAGAGTGAAGCGCCGCCAACGACAAGGCCTGCCTCTTTACTCCGATGAACCTGATCGTTCCAACGCCACCACCCCTCCTCCTAATAATGCCTCACATCAGTACGAGTTCCTTCATCACCGTCACCTTCAACATTCTTTGCCTTCTCCTTCTCCACAACCCCAATATTCTCCTCTTTCGTCCCCAATTCAGCCTAAGCCCGCCATTTCTGACCCCATGATCCCTCTTTCTTCTCCTTCTTCTTCTGTCACGTCATCCCATTCCTTCGTCTTCAACCGCCCCGCCCCGCTTCTCTCTAACCCTCTCACCTTCAAGCGATTCCGTACTTCTACAGGTTTTCCCCTCCGGCTCGCCCCAAATAATATTGTAACCTCTTCTTCGCTTCCGGGTCAGCACATGACGCCGCCGCCTCAGTCATCGCTCGGGTTTTCTAGATTCGGAAATACGGGTCAAGTTAACTCGGGTTTGTCCCATAATATTTATCAAGCTCCATTGTTAGAGCATGATAATCGAGGAGGGGCTTTGAACCAATTTGGGAATCCCCCAGCAAAACTACTTGAGCTCTATTCAAACCAATTTTCCCCTCACCAGCCTAATAATAATATTATACAGACAGAGAGTAATAAATTTAACATGCAAATGAACCATACTGATGATCGTATGAAGAACAGTAGTGGTGGTGGTAATAACAACGGGTTTCTGGGAGATCATTTCTGTGAAGTTCAGAGTTTGACACCTGGCCACCCAGCGGCACTGCAGAAACAAAGTTATTTCTATACAGATGAAGGGAATGATCTTGACGGACACCGTGGCTTTGATGATTTGCCTCTTAATTCTTCTAACTGGCCTTCAAATAATGCAGAACTGAAACTGAAGGAAGAAGCACAATACCAGCGTACATCCATGAATGACGACCTATGTTCGATGATTGACGTTATGCCATCTTCACTGTCGGTTTCAGATTGGCCAGCCAGCAATGCTGCGGAAGCTTCTAATAATAATTTTCCATCTTCTGGCGTTAATATTCCAGACGATAACTTTGGACTTGACACTAAACCCATTGCTTCTTTGTTTCCCATCTCAACCACTACAACAAATCATACTGACAACTCTGGATGTTACTCTTGGGACGACTTACCAGGATTTTGCTGA 1551 0.4687 MTTNNTEEAKHEGEETLVGVTGERGGGAAASEEIVLKKGPWTAVEDAVLIEYVTKHGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLILELHAQYGNKWARMASLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDEPDRSNATTPPPNNASHQYEFLHHRHLQHSLPSPSPQPQYSPLSSPIQPKPAISDPMIPLSSPSSSVTSSHSFVFNRPAPLLSNPLTFKRFRTSTGFPLRLAPNNIVTSSSLPGQHMTPPPQSSLGFSRFGNTGQVNSGLSHNIYQAPLLEHDNRGGALNQFGNPPAKLLELYSNQFSPHQPNNNIIQTESNKFNMQMNHTDDRMKNSSGGGNNNGFLGDHFCEVQSLTPGHPAALQKQSYFYTDEGNDLDGHRGFDDLPLNSSNWPSNNAELKLKEEAQYQRTSMNDDLCSMIDVMPSSLSVSDWPASNAAEASNNNFPSSGVNIPDDNFGLDTKPIASLFPISTTTTNHTDNSGCYSWDDLPGFC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0878 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Acco05g0878 516 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 467 - -
Acco05g0878 516 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Acco05g0878 516 CDD SANT 40 85 IPR001005 -
Acco05g0878 516 FunFam Transcription factor GAMYB 93 139 - -
Acco05g0878 516 SMART sant 37 87 IPR001005 -
Acco05g0878 516 SMART sant 90 138 IPR001005 -
Acco05g0878 516 FunFam MYB-related transcription factor 37 90 - -
Acco05g0878 516 Gene3D - 37 90 - -
Acco05g0878 516 Gene3D - 93 177 - -
Acco05g0878 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 85 IPR017930 -
Acco05g0878 516 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Acco05g0878 516 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Acco05g0878 516 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Acco05g0878 516 CDD SANT 93 134 IPR001005 -
Acco05g0878 516 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Acco05g0878 516 MobiDBLite consensus disorder prediction 151 165 - -
Acco05g0878 516 MobiDBLite consensus disorder prediction 140 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0878 Acco-ChrAcco05 16756695 16759906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0878 25 223 MYB Transcription Factor Family AT4G26930 53.589 1.46e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g0878 Myb_DNA-binding 9.9e-13 CL0123