Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0869 ATGGTTAGAAAGAGAATGGCTTCTGAAATGGAAGTTCACACCACAGCCCATAACTCCGCCGGCGCCGGAGATTATCATCTCCGGTGTCCCCGTCAGAGTAATGTGGTGGCTTCCTCCCTATTATCCACCGTAGATAAAGCAGCAGCAGCAGCTTCAAGTAGTAATAACAGTAAGTGTAATAGCTATCATTGTAAATCTGCCTCACGAGATAATGTTCCTATTCCTAACCCCACAACAGTGACTCTCTCCAACAACTACTCCACTACCACTCTTCTACCTTCTTCCACTAATCTCACCACCGTGACGTCACCCAGCTATAGCAATCGTCACTGCGGTGAAAACCTCTCTCTTCTTCATCTTCAAGCCTTTCAACCTCAGACTCAGCAGGACCCTTCGCCAATTACTCCTGCGGTGTGTGGATTTTCCGGCTTGCCTTTATTTCCTTCTGAAAGTAATCGGGTTGATAGTACCGGTAATAGTACTGCTGCGACGGTCGACGGTGTTGCTTCGGTGGCCACAAACGCCGACGCTGGCCGACCTTCTTGTTTGTCATCTTCTATGGAGGATAGTTCAGCTTTGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACCGCCGTGTCCATCCCACAGCTCATCAACAACGTTAGGGAGATTATTTATCCTTGTAATCCCAACCTGGCTGTCATTCTTGAATACAGACTCCGCCTCCTCACTTCTGGCAATACTACTTCTGAATCTGTTCTAAATTATGGTGACAAGAAGAGGACGGAACCGCCGCCGCCTCCTCCGATGGTACCGGTGGCGGCTGTGAGGCCTTTTGTTCAGCAAGTAGTAGGCCCCTCTTTTGCCGCCATAGCTCCCAACTTGCATATTCCAAACTCTTCCATTGTTTCTCCATCTGTTGGGAACCAGATGTACTCAAATTGGGGACTACCACCTACGGTGACGGCCTTAACCCATGACGGCGCCAACCACCCGTCGGTGATTACCTTACCACTATCTCCACTATCATCGTCAAATCATCAAGGTCATTCGCCACAGGAAGAGCAACAATTTCATGAGAAAGAACAAGAGAATCTGAACCAGCAACAAGAAGAGGGGGTTTCAGTTTCTCCCCCTTCTGATAATAATCGAACAGCAGCAACAACGGTGGCGGCGGGCGGCTCAGCTGCAGAAATCGTTCTAGCAAAAAAGAAGAAAGAGGAGATGCAGCAACAGAAGAGAGATGAAGAAGGCTTACACCTCCTAACTTTGCTGCTTCAGTGTGCGGAGGCTGTGGCGGCTGATAACTTCGATGAAGCCAATAAGATGTTGCTGGAGATTTCACAACTCTCCACACCGTTTGGCACGTCGGCGCAGCGGGTGGCGGCGTATTTCTCGGAAGCCATTTCTGCGAGGCTGATTAACTCATGCTTGGGAATATACGCTACTCTTCCAATGGTTCCTCATAGCCAAAAGATGGTATCAGCTTTCCAAGTTTTCAATGGGATTAGTCCTTTCGTCAAGTTTTCACACTTCACCGCGAATCAAGCTATACAAGAAGCTTTCGAGAGGGAAGGGAGGGTGCACATCATAGATCTAGACATAATGCAAGGATTACAATGGCCTGGCTTGTTTCACATTCTGGCTTCAAGAGCTGGTGGACCCCCTTACGTCAGGCTTACAGGGCTTGGCAACTCCATGGAAGCTCTTGAAGCTACGGGCAAGAGGTTGTCTGATTTCGCAAATAAATTGGGACTTCCTTTTGAGTTCTTTCCGGTGGCCGACAAAGTTGGGAATCTTGACGCTGAGAGATTATGTGTAAGCAAGACAGAAGCTGTGGCCGTCCACTGGCTCCAACATTCCCTTTATGATGTCACTGGCTCTGATACTAATACTTTGTGGCTTTTGCAAAGGTTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGATCTGAGCCACGCGGGGTCATTCTTAGGGAGATTTGTGGAAGCCATACATTACTACTCAGCTCTATTTGATTCGCTGGGATCAAGCTATGGGGAGGAGAGTGAGGAGAGACACGTGGTGGAGCAGCAGCTTCTGTCGAGGGAGATTCGAAACGTGCTGGCTGTCGGAGGTCCGTCGAGGACCGGCGAGCTCAAGTTCCATAACTGGCGGGAGAAGCTTCAGCAATGTGGGTTCCGAGGTATCTCCCTCGCCGGAAACGCCGCCACGCAAGCCAGCCTTCTTCTCGGCATGTTCCCTTCCGATGGGTATACCTTGGTGGAAGATAATGGCACTCTTAAACTTGGTTGGAAAGATCTCTGCTTGCTTACTGCTTCTGCTTGGAGACCTTCCTTCCATAATAATTCCAACGCTGCCATCGTCCAACATGGTTGA 2373 0.4956 MVRKRMASEMEVHTTAHNSAGAGDYHLRCPRQSNVVASSLLSTVDKAAAAASSSNNSKCNSYHCKSASRDNVPIPNPTTVTLSNNYSTTTLLPSSTNLTTVTSPSYSNRHCGENLSLLHLQAFQPQTQQDPSPITPAVCGFSGLPLFPSESNRVDSTGNSTAATVDGVASVATNADAGRPSCLSSSMEDSSALAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSGNTTSESVLNYGDKKRTEPPPPPPMVPVAAVRPFVQQVVGPSFAAIAPNLHIPNSSIVSPSVGNQMYSNWGLPPTVTALTHDGANHPSVITLPLSPLSSSNHQGHSPQEEQQFHEKEQENLNQQQEEGVSVSPPSDNNRTAATTVAAGGSAAEIVLAKKKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYATLPMVPHSQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREGRVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGNSMEALEATGKRLSDFANKLGLPFEFFPVADKVGNLDAERLCVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNNSNAAIVQHG 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0869 790 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 372 770 IPR005202 -
Acco05g0869 790 MobiDBLite consensus disorder prediction 333 384 - -
Acco05g0869 790 MobiDBLite consensus disorder prediction 351 365 - -
Acco05g0869 790 Coils Coil 397 417 - -
Acco05g0869 790 MobiDBLite consensus disorder prediction 366 384 - -
Acco05g0869 790 ProSiteProfiles GRAS family profile. 410 775 IPR005202 -
Acco05g0869 790 Pfam GRAS domain family 420 775 IPR005202 -
Acco05g0869 790 MobiDBLite consensus disorder prediction 334 350 - -
Acco05g0869 790 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0869 Acco-ChrAcco05 16339217 16341741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0869 368 776 GRAS Transcription Factor Family AT3G54220 81.356 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco05g0869 GRAS 6.5e-123 CL0063