Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0858 ATGTCTTCTGCTGCTTTGCAATGGCTGAGCCTTGTGGGAATGATATGGCTTCAAGCCATTAATGGCACAAACAACAATTTTCCTGCGTACTCCTCTCAGTTAAAGCAGCTTCTTTCTATTTCTCAACTACAGCTCAACAACTTAGCCTTCGCCTCCGATGCTGGGAAACTCTTCGGCTGGTTGTCCGGCGTTGCCATCACGTACCTACCTCTCTGGCTTGTCCTTGTCATTGGCTCAATCCTTGGGCTAATAGGCTATGGTGTGCAATATCTCTTCATAACAAACCATATCTCTTCTCTTTCCTATTGGCATGTCTTCTTCCTCACAGTTCTAGCAGGAAACAGCATTTGCTGGATCAACACTGTCTGTTATGTCGTTATCATCCGAAACTTCCCGGCCGACCGCCAAGTCGCCGTGGGATTATCAACTAGTTACCAAGGATTAAGCGCCAAGATTTACACCAATATAGTTGAATCTGTTTCCCCACATAAAAAGGCCAGAACCTTTCTTTTTCTCAACTCTGTAACACCCCTGATAGTTAGCCTAATAACAGCTCCTTTGGTTAGAGAAATTAAAGCGAAAACAACGAAAATAGGATCTTCCTCTTCTTCACACATGGGTGTTGGGTTTATAGTAATGTTTGTTATTACAATTGGAACTGGGATATTTGCTGTTATGACCAGCTTACAATTTTTATCACGAAAGTTGTCACCTTTGAGTAGTTTGATTGGTATTTCAGTGACCCTTTTGATTCCTTTGTTGGTTCCAATCATAGAGAAGGTTAAAGAATTAGTGGGGTTATGGCAGACAAAAAGAGAGAAGCAAAGAGTGTATCATTTTACAGCAGAAGAGAACAGCACTGATACTGAAGAAAGGAGAACAGAGGATGAAGTAAAAGATGATGAAGAAAATCATGTTGGTTTTGGTGTGAGAGAAGAAATTGGATGGAAGTTGATCATGAGAAGAATTGATTTCTGGTTATATTTCTTTGTGTACTTTTTTGGAGCCACAATTGGGATGGTTTTTTTGAACAACTTGGGCCAGATTGCAGAATCCAGAGGCTGTTCTGGAACTTCATCTCTGGTTTCATTGTCTTCTTCCTTTAGTTTCTTTGGCCGTTTGATGCCTTCTCTCTTGGATTACTTCTACAGGGGAAAGTCCAGAATCTCAAGACCAGCTACAATGGTGGCATTAATGGCGGTGACATCGGCATCATTCTTTCTACTTCTGAATCGAAAAGACCTATCCCTGTACATGAGCACCGCCATGATTGGAATCTGCACTGGGGCCATAACCTCCATAGCAGTGTCCACAACAACAGAACTATTTGGCACAAAGAACTTCTCAGTGAACCACAACGTAGTTGTGGCCAACATACCCATCGGCTCCTTCTTATTCGGCATATCGGCCGCCCTTGTCTACCGGAAACACGGGGACCACGGCAAATGCTTCGGCATGGAGTGTTACAGAAGCACCTTCATCTTGTGGGGTTCTCTTTGTTGTTTGGGCACTGTCCTGGCCTTAATTCTCCATGCTAGAACTCGCAAGTTTTACTCACAAAAGCCTTAG 1569 0.4302 MSSAALQWLSLVGMIWLQAINGTNNNFPAYSSQLKQLLSISQLQLNNLAFASDAGKLFGWLSGVAITYLPLWLVLVIGSILGLIGYGVQYLFITNHISSLSYWHVFFLTVLAGNSICWINTVCYVVIIRNFPADRQVAVGLSTSYQGLSAKIYTNIVESVSPHKKARTFLFLNSVTPLIVSLITAPLVREIKAKTTKIGSSSSSHMGVGFIVMFVITIGTGIFAVMTSLQFLSRKLSPLSSLIGISVTLLIPLLVPIIEKVKELVGLWQTKREKQRVYHFTAEENSTDTEERRTEDEVKDDEENHVGFGVREEIGWKLIMRRIDFWLYFFVYFFGATIGMVFLNNLGQIAESRGCSGTSSLVSLSSSFSFFGRLMPSLLDYFYRGKSRISRPATMVALMAVTSASFFLLLNRKDLSLYMSTAMIGICTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFLFGISAALVYRKHGDHGKCFGMECYRSTFILWGSLCCLGTVLALILHARTRKFYSQKP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0858 522 Gene3D MFS general substrate transporter like domains 264 516 IPR036259 -
Acco05g0858 522 SUPERFAMILY MFS general substrate transporter 6 195 IPR036259 -
Acco05g0858 522 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 519 - -
Acco05g0858 522 SUPERFAMILY MFS general substrate transporter 213 516 IPR036259 -
Acco05g0858 522 Pfam Nodulin-like 7 257 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0858 Acco-ChrAcco05 15931030 15933769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0858 1 522 Nodulin-like Gene Family AT2G30300 51.036 1.67e-167 482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1507 10 28827501 28829309 Acco05g0858 05 15931030 15933769 CCT
Acco05g0858 05 15931030 15933769 Acco05g0858 05 15931030 15933769 ECH