Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0847 ATGGAGAATAAACCAAGTATATTAACGCAAAAATATGAATTAGGAAGGCTACTAGGCCAAGGTACCTTTGGAAAGGTATATTATGCCCGTAGTACAATAACTAGCCAGAGTGTAGCTATTAAAGTGGTAAGCAAGGACAAAGTTGTGAAATCTGGACAAACTGAACAAATCAAGAGGGAAATATCTGTAACGAGACGTGTTAGACATCCCAACATTATACAGCTTTATGAGGTTATGGCCACCAAGAGTAAGATCTACTTTGTTATTGAATACGCTAAAGGTGGTGAGCTCTTTGACAAGGTGGCCAGGGGAAAGCTCAAGGAAGATGTTGCTCATAAGTATTTTCAGCAGCTAGTGAATGCCATTGACTTCTGTCATAGTAGAGGTGTTTACCACCGCGACATAAAGCCGGAGAACCTTTTATTGGATGAAAATGAGAACCTAAAGGTCTCTGATTTTGGATTGAGTGCTCTAGCTGAATCCAAGAGGCAGGATGACCTACTTCATACGCCTTGTGGCACGCCTGCCTATGTTGCTCCTGAAATCATCAAAAGGAAAGGTTATGATGGTGCCAAAGCTGATACTTGGTCTTGTGGGGTAGTTTTGTTTGTCTTACTTGCAGGGTATCATCCCTTTCATGATCCAAATTTGATAATGATGTATAGGAAGATTTCCAGGGCAGACTATAAATTCCCTAATTGGTTTTCCCTAGAAGTACGTAGACTGTTAACGAAGGTCTTGGATCCTGATCCTGATACTAGAATCCCCCTAGCCAAGATTAAGGAATCTTCTTGGTTTATGAAAGGGCCATCTTCTAGAGAAAGGAAATCTGAATGGGTGAACAAGAGTGTCTCCACATCAAGCACAAAGCCTTGTGATCAAACCGGTGAAAGTAAGAGCATAGCAGCAGAAGTGACACAAGAGTCGGTTGTGGCCACAACTATAAATGCTTTTGACATCATCTCCCGATCTAAAGGTTTCGATCTATCCGGATTCTTCGAAGATAGTTTCAAGAAGATGGATGCAATATTTTCTTCAAGGCAGCCAGCCTCTGTCATTGTCTCCAAGCTGGAAGAAATTGCTAAGCATCTGAGGCTGATGATAAAGAAAAGAGCTGCAGGTTTGTTTAAAATAGAGGGCCTCAAGGAAGGAAGAAAAGGGATTATATCCATTGAGGTGGAAATCTTCGAGGCTGCTCCATGTTTCCATTTGGTTGAGATGAAAAAATCAAATGGAGACACTTTTGAATATCAGAGCATATTGAAAGAGGAAATTAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCAAGGGGAACAGCAGCAGCAACAATCACAACCATCAGACGACCAGAGACAGATGCATGACCAGCCAGCGACAGCGTCCACATCTACGACACATTCTTAA 1407 0.4186 MENKPSILTQKYELGRLLGQGTFGKVYYARSTITSQSVAIKVVSKDKVVKSGQTEQIKREISVTRRVRHPNIIQLYEVMATKSKIYFVIEYAKGGELFDKVARGKLKEDVAHKYFQQLVNAIDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDDLLHTPCGTPAYVAPEIIKRKGYDGAKADTWSCGVVLFVLLAGYHPFHDPNLIMMYRKISRADYKFPNWFSLEVRRLLTKVLDPDPDTRIPLAKIKESSWFMKGPSSRERKSEWVNKSVSTSSTKPCDQTGESKSIAAEVTQESVVATTINAFDIISRSKGFDLSGFFEDSFKKMDAIFSSRQPASVIVSKLEEIAKHLRLMIKKRAAGLFKIEGLKEGRKGIISIEVEIFEAAPCFHLVEMKKSNGDTFEYQSILKEEIRPALKDIVWVWQGEQQQQQSQPSDDQRQMHDQPATASTSTTHS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0847 468 MobiDBLite consensus disorder prediction 281 299 - -
Acco05g0847 468 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Acco05g0847 468 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Acco05g0847 468 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Acco05g0847 468 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0847 468 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0847 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 430 - -
Acco05g0847 468 MobiDBLite consensus disorder prediction 277 299 - -
Acco05g0847 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Acco05g0847 468 CDD CIPK_C 316 430 - -
Acco05g0847 468 SUPERFAMILY Protein kinase-like (PK-like) 8 294 IPR011009 -
Acco05g0847 468 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0847 468 Gene3D Transferase(Phosphotransferase) domain 1 99 315 - -
Acco05g0847 468 Pfam NAF domain 313 370 IPR004041 GO:0007165
Acco05g0847 468 MobiDBLite consensus disorder prediction 440 468 - -
Acco05g0847 468 Gene3D Phosphorylase Kinase; domain 1 6 98 - -
Acco05g0847 468 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Acco05g0847 468 Gene3D Kinase associated domain 1, KA1 316 435 - -
Acco05g0847 468 FunFam Non-specific serine/threonine protein kinase 6 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0847 Acco-ChrAcco05 15345161 15346567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0847 1 445 CBL-interacting serine-threonine protein kinases AT5G58380 64.551 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco05g0847 Pkinase 1.6e-73 CL0016