Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0841 ATGAAGGAGGACAACGTCAATGCCTTGTTCGGCAAATATGAACTCGGAAAGCTTCTGGGTTGTGGCGCCTTCGCTAAGGTCTACTATGGCTGTAACCTTCACACGTTCCAAGGTGTCGCCATTAAGGTTTTCAACAAGAAGATCACCAGCTCCGGTCTCACCTCCAATGTCAAGCGCGAGATCGTCATCATGAGGCGGCTCCGTCATACCCATTTCGTCGGGTTCCACGAGGTCCTCGCCACAAAGACGAAGATCTTCTTCGTCATGGAGTTGATCAAAGGTGGCGAGTTATTCTCCAGAATCGCCAGGGGACGCTTTTCGGAGGATCTCAGCCGTAAATATTTCCAGCAGTTAATCTCTGCCGTTGGGTACTGCCACTCACAGGGTGTTTTCCACCGCGACTTGAAGCCGGAAAATCTTCTCCTCGACGAAAATGGCAATCTCAAGGTTTCGGATTTCGGGTTGAGCGCTCTCAGAGATCAGATCCGACCCGATGGGTTGCTTCATACGCTCTGCGGCACGCCGGCGTACGTGGCACCGGAGGTTCTGTCAAGGAGAGGCTACGACGGAGCAAAGGTCGATGTTTGGTCGAGCGGCGTCATTCTCTTCACGTTGGCTGCTGGATATTTACCCTTCAATGACCCGAATCTCATGGTGATGTACAAGAAGATTCACAAAGGAGAATTTCGGTGTCCGAGGTGGATGTCGCCGGAGCTAAGGCGATTCCTGTCACGGCTACTTGACACGAATCCGAATACCCGGATCACCGTCTGTGAGATCCACCGGGATCCGTGGTTCAGAAAAGGCTACAAGGAGATGACGTTCAAGGAGGATGATTTCGGGTTTGGGTCCGGGTCAGGGTCTGAGAATAATGGAGAGAAGGCAGAGATAATGCAATTGAATGCGTTCGATATTATTTCCTTCTCGTCTGGGTTGGATGTATCCGGTTTGTTCTACAACGCGGTGGCGGAGAGAAGCGAGAGGTTCGTGTCATCGGAGTCTCCAGAGAAGATAATGGAGATGGTGGAGGTGGTGGCGAGGGCGGAGGGGCTGACCGTGAGAAGGAGGACGAAAGATTGTCGGGTGGCGGTCGAAGGTGTAAGGGACAATATGGGAATTTGGATGGAAGTTCACCGGTTAACGGATGAGCTGGTGGTGGTTGAGGCAAAAATGATGGGATTAAACGGTGTCGTTTTTATTGAGCGTCTTTGGAACAACAGGTTAAAGCCTTTACTCTGCGATTCGGCCTGTACCTCTGGCAATACGTGGCACCAAATATAA 1281 0.5144 MKEDNVNALFGKYELGKLLGCGAFAKVYYGCNLHTFQGVAIKVFNKKITSSGLTSNVKREIVIMRRLRHTHFVGFHEVLATKTKIFFVMELIKGGELFSRIARGRFSEDLSRKYFQQLISAVGYCHSQGVFHRDLKPENLLLDENGNLKVSDFGLSALRDQIRPDGLLHTLCGTPAYVAPEVLSRRGYDGAKVDVWSSGVILFTLAAGYLPFNDPNLMVMYKKIHKGEFRCPRWMSPELRRFLSRLLDTNPNTRITVCEIHRDPWFRKGYKEMTFKEDDFGFGSGSGSENNGEKAEIMQLNAFDIISFSSGLDVSGLFYNAVAERSERFVSSESPEKIMEMVEVVARAEGLTVRRRTKDCRVAVEGVRDNMGIWMEVHRLTDELVVVEAKMMGLNGVVFIERLWNNRLKPLLCDSACTSGNTWHQI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0841 426 CDD CIPK_C 301 413 - -
Acco05g0841 426 Gene3D Transferase(Phosphotransferase) domain 1 4 300 - -
Acco05g0841 426 Gene3D Kinase associated domain 1, KA1 301 416 - -
Acco05g0841 426 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Acco05g0841 426 SUPERFAMILY Protein kinase-like (PK-like) 10 274 IPR011009 -
Acco05g0841 426 Pfam NAF domain 299 354 IPR004041 GO:0007165
Acco05g0841 426 SMART serkin_6 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0841 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Acco05g0841 426 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Acco05g0841 426 ProSiteProfiles Protein kinase domain profile. 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0841 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 389 - -
Acco05g0841 426 FunFam Aurora kinase A 6 95 - -
Acco05g0841 426 FunFam Non-specific serine/threonine protein kinase 92 273 - -
Acco05g0841 426 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0841 Acco-ChrAcco05 15213957 15215237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0841 4 419 CBL-interacting serine-threonine protein kinases AT2G30360 59.953 8.64e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco05g0841 Pkinase 8e-67 CL0016