Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0813 ATGGCTGGGATTGATGATAATGTTCCTTTAAATGGCGACTGGGGCCCTCCTAGTCCGAGTCCAAGATCATTTTTCTCTAAAATGCTAGGTGAAGATAATCTTTCAAGACAAATCTCAGAGCCTCTTGGAAATGGTAGAACTAAGGAGCTCTTTGTGCTACAAAATCAAGAGCTCATTATGACCGGAAATTTCAACACAAGAGATATAGCACAACAAGATGACGCTTCTGGTAGCCAATTTAATGGCACAACTTCTTTGTCTGAGAATAAGTCTAGCTCGCGAGGAAACCTTGTTGAAAGGATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCTGATCCTACGATGAATTCGGATACTAGATCTGCTTACTTAACCATACCGCCTGGACTCAGTCCGACCACACTTTTAGAGTCTCCGGTGTTCCTTTCTAATTCGCTGGCACAACCGTCTCCAACAACCGGAAAGTTTCCATTTAGCACAAATGGCAACTTCCAGGGTTCGGAACCGAACCCTGGTGCTACTGGAAAAACTAAAGATTACAACTTTGATGACATTTATGCATCATCGTTTGCTTTCAAGACTACAACAACAGATTTGGACTCTTTCTATAATGGTGCTGCTAGAAAAATGAATCGAACCGCACTGCCAGAACAATATCTTACTGCTGAGGTCTCAGCTCCAACTGACCCTCCTGCTCCAAATGTCAGTAGAGCATCAGTTGAGGAACCAGCAGATGAAGAAGGAGGTCAAAGAGGAAATGGAGATTCTCAGGCTACTGGTGTTGGGGGTACACCATCTGAAGATGGATATAACTGGAGAAAGTATGGACAGAAACAAGTTAAAGGTAGTGAGTATCCACGAAGTTACTACAAGTGTACGCACACGAATTGCCCTGTAAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACAGAAATAATCTACAAGGGGAATCACAACCATCCAAAACCGCCCACAAATCGCAGATCTGCTGTAGGGTCTCTTAACCCTCTCGGTGACATGCAAGCAGATGCATCTGAAAGTACTGAACCACATGGTGTGGGTGACGGTGAACTGGGCTGGACAAGTACACAAAAAGGAAATATGTCTGGAAATGTGGACTGGAAGCATGAGAACCTTGAAGTGACCTCCTCAGCAGCATCTGTGGGCCCTGAATTCGGCAACCAGTCCACCAATTTGCAGGGTCAGAATGGTGCTCAATTTGAATCAGGAGATGCAGTGGATGGCTCATCTACTTTCTCTAACGATGAGGATGATGATGATAGGGCCACTCATGGTAGTGTATCAGTTGGTTATGATGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATTCGGGAGCCTAGAGTTGTTGTTCAAACTACCAGTGATATAGATATCCTCGACGATGGATACCGTTGGCGTAAATATGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTATAAGTGCACTAATGCGGGTTGCACAGTGAGGAAGCATGTGGAGAGAGCATCACATGACCTGAAATCTGTGATTACTACATATGAAGGAAAGCACAATCATGATGTTCCTGCGGCTCGCAATAGCAATCAAGGCAATAATGCTGCAGCTTCTAGTGCTGCTACTGTTCAAGCTGCTTCTTTTATTCAGAGTCACAGAGGTGAGGCTTCACAAGTTCACAACAGAATTGGAAGGCTTGAGAGGCCTGTTTTGGGCCTGGGCTCGTTCAACTTACCCAGGACCGGGCCTGGGCCCGGGAGGCCACAATTAGGGCCTTCTCATGGCTTTTCGTTGGGAATGGGAATGAATCAATCAGGCTTCCCCAATATAGCCGCCATGGCGGCTTTGGGCCCGGCCCATGATAAGCATCCGGTCATGCCGGTTCATCCGTTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTTGCCCAAAGGAGAGCCCAATTTGGAGCCCATTCCAGACCGCGGGCTTAATATGCCCGCTGGTTCTTCAGTATATCAGGATATAATGAATCGGATGCCACTTGGACCCCATATGTAA 2139 0.4586 MAGIDDNVPLNGDWGPPSPSPRSFFSKMLGEDNLSRQISEPLGNGRTKELFVLQNQELIMTGNFNTRDIAQQDDASGSQFNGTTSLSENKSSSRGNLVERMAARAGFNAPRLNTESIRSADPTMNSDTRSAYLTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFSTNGNFQGSEPNPGATGKTKDYNFDDIYASSFAFKTTTTDLDSFYNGAARKMNRTALPEQYLTAEVSAPTDPPAPNVSRASVEEPADEEGGQRGNGDSQATGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCPVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSAVGSLNPLGDMQADASESTEPHGVGDGELGWTSTQKGNMSGNVDWKHENLEVTSSAASVGPEFGNQSTNLQGQNGAQFESGDAVDGSSTFSNDEDDDDRATHGSVSVGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNNAAASSAATVQAASFIQSHRGEASQVHNRIGRLERPVLGLGSFNLPRTGPGPGRPQLGPSHGFSLGMGMNQSGFPNIAAMAALGPAHDKHPVMPVHPFLPNQRPPNMGFMLPKGEPNLEPIPDRGLNMPAGSSVYQDIMNRMPLGPHM 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0813 712 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 571 IPR044810 GO:0003700
Acco05g0813 712 MobiDBLite consensus disorder prediction 398 468 - -
Acco05g0813 712 MobiDBLite consensus disorder prediction 1 27 - -
Acco05g0813 712 MobiDBLite consensus disorder prediction 74 95 - -
Acco05g0813 712 MobiDBLite consensus disorder prediction 233 281 - -
Acco05g0813 712 FunFam WRKY transcription factor 33 482 548 - -
Acco05g0813 712 MobiDBLite consensus disorder prediction 398 428 - -
Acco05g0813 712 Gene3D WRKY domain 265 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 MobiDBLite consensus disorder prediction 452 466 - -
Acco05g0813 712 Pfam WRKY DNA -binding domain 496 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 SMART WRKY_cls 495 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 SMART WRKY_cls 275 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 Gene3D WRKY domain 482 548 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 SUPERFAMILY WRKY DNA-binding domain 273 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 SUPERFAMILY WRKY DNA-binding domain 487 555 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 MobiDBLite consensus disorder prediction 326 382 - -
Acco05g0813 712 ProSiteProfiles WRKY domain profile. 276 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 ProSiteProfiles WRKY domain profile. 490 555 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g0813 712 FunFam WRKY transcription factor 265 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0813 Acco-ChrAcco05 14235829 14239518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0813 1 707 WRKY Transcription Factor Family AT5G56270 48.745 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g0813 WRKY 3.6e-24 CL0274