Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0808 ATGAAAAGGAACAGATGCTTTATATTGATTCAGTTTCATGGTGATAACTGTGAACTGAATCAGGCTGCTCGATCACTTTCTCAGGATTTTGGTTCTTGTCTAGGCACTGATCCTACGGCGTCAGAGGCCAAAAAGAAAACCGGCCAGATTATGGCGTCATCGTCGAGCAGTGGATTGACATTCAAGCTACATCCTGTGGCGATAGTCAACATATCGGATCATTTTACTCGGGTTAAGATGCAGATGAACCCGCCCAATGCATCCCATCAGAGAAGTACCACCTCCGCTAACTCTAATGCTGCCGACGAAATGGTTTCCCCTCCTCCTAGGGTATACGGATGCGTGATAGGAGTACAGAGAGGACGCACCGTGGAGATCTTCAATAGCTTCGAACTTCTTTACGACCCTTCTACCCACTCCCTCGATCGTTCTTTTCTTGAGAAGAAGCAAGAGCTCTACAAGAAGGTTTTCCCCCACTTCTACATACTGGGATGGTATTCAACTGGGAGCGATGCCCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCTGTGTATGTACTTCTGAATCCTTCAATCAATCATGCTCAGAAGGATCTCCCTGTCAGTATTTTTGAAAGTGAACTGCATGTAATTGACGGGATTCCACAACTGATCTTTGTTCACTCGAGCTACACTATTGAGACTGTTGAAGCAGAACGGATTTCAGTTGATCATGTTGCACATCTTAAGCCATCGGATGGTGGTTCAGCTGCTACACAACTGGCTGCTAACCTTACTGGTATGCACAGTGCTATTAAAATGCTGCATAGCAGAATTAAGGTGCTGCATCATTATCTTCTTGCAATGCAGAAAGGTGAAGTCCCTTGTGACAATTCTCTGTTAAGGCAAGCATCAAGTCTCCTGAGAAGATTGCCAGCGATTGAATCTGGAAAATTCCAAGATGATTTCTTGATGGAATACAATGATACCTTATTAATTACTTACCTTGCTATGATGACCAACTGCTCAAGTGCAATGAACGAACTGGTAGACAAATTCAATACTGCATACGACAGGCATAGCAGAAGGGGTGGGCGAACTGCTTTTATATGA 1113 0.4376 MKRNRCFILIQFHGDNCELNQAARSLSQDFGSCLGTDPTASEAKKKTGQIMASSSSSGLTFKLHPVAIVNISDHFTRVKMQMNPPNASHQRSTTSANSNAADEMVSPPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIFESELHVIDGIPQLIFVHSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAANLTGMHSAIKMLHSRIKVLHHYLLAMQKGEVPCDNSLLRQASSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMMTNCSSAMNELVDKFNTAYDRHSRRGGRTAFI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0808 370 Gene3D Cytidine Deaminase, domain 2 47 251 - -
Acco05g0808 370 ProSiteProfiles MPN domain profile. 88 217 IPR037518 -
Acco05g0808 370 CDD MPN_CSN6 59 366 IPR033859 GO:0000338|GO:0008180
Acco05g0808 370 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 57 189 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco05g0808 370 MobiDBLite consensus disorder prediction 82 104 - -
Acco05g0808 370 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 51 361 - -
Acco05g0808 370 Pfam Maintenance of mitochondrial structure and function 237 351 IPR024969 -
Acco05g0808 370 MobiDBLite consensus disorder prediction 82 102 - -
Acco05g0808 370 SMART pad1_6 60 216 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco05g0808 370 FunFam COP9 signalosome subunit 6 51 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0808 52 356 Eukaryotic Initiation Factors Gene Family AT2G39990 23.548 6.03e-09 54.7