Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0790 ATGGGGGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACGAAGGAGTGCATTTTCGCTCCTTACTTTCCTTCTGATGATCCTCACAAGTTCGCCATCGTCCACAAGGTCTTCGGTGCCAGCAATGTCAGTAAAATGTTGCAGGAGCTTCCGGTGCATCAAAGAGCGGATGCCGTGAACAGTCTGGTTTACGAAGCGAATGCGAGAGTTAGAGATCCGGTGTATGGATGCGTAGGAGCCATATCATATCTGCAAAGTCAAGTTTCACAGCTAAAATTGCAGCTTTCGGTTGCTCAAACAGAGATTATGTGCATCCAGATGCAGCAAGATCCTACAAACTTATCAACTCAGATTGATAATTACCAAGACGACAAGTCACTAATCTTGTCTGATAATAACTACGAAAGCAGCAATATTCATAATAATAATTATCTCAGCTTTGTTTCTTCTTCCTCCTCGTCTAGTAATGTAATGCAAGACCCTTTTAAGAGAGAGTCATATTGGAATTAG 522 0.431 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVYEANARVRDPVYGCVGAISYLQSQVSQLKLQLSVAQTEIMCIQMQQDPTNLSTQIDNYQDDKSLILSDNNYESSNIHNNNYLSFVSSSSSSSNVMQDPFKRESYWN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0790 173 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Acco05g0790 173 MobiDBLite consensus disorder prediction 154 173 - -
Acco05g0790 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 142 - -
Acco05g0790 173 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0790 Acco-ChrAcco05 13371456 13372451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0790 3 173 AS2 family AT2G30130 65.608 3.46e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco05g0790 LOB 2e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0790 05 13371456 13372451 Acco05g0790 05 13371456 13372451 ECH