Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0781 ATGGCCGCTGCCTTGGAGTGTTGGTCCAGCCGTGCCAGTACGGACGAGGAAATGGTGGAGCAGGTTCTGATGAGGACGCAGGATAGATCCGAGGGCGAAACGACGTCGGAGAGCTCTTCCGCTGCTGCTGGTGGACTCAAGGAGACTTCGCAGATGCAGAAGAAATTTCAGAGGCTGAGTCGGAATGTTACCGAAGCTATAGCGTTGTTCAAGAACTCGCTCAATCTGGATTCTGCTCGTGACTCAGCGCCTCCTTCGAAGGTGGATAATTCTCGGAAAGTTGTGTGGGGAAGTGTCGTCCGGAATCTCACTCAGCTTTATCCAGGTAGCCAGCTGCCGGAGAAGCTCATGTCCAATATTCGCAAGCATTACGATTCGTTGCCTCTCAGTTATGCTCAGGCGGGATTTGATATGAAAGATGTATTTCTGCACATCAAGTTGATGGAGCAAGCGTCAGTAGATGATCAGCCTGCAATCCTTATCCAAGAAGAACCGGATAATGAAATTCAAGGGTGTATATTTAAGCTGACTTTTTCTTGTCACTCTCCAATTTCATGGCCTTCAATGTCCAGTGCACTGGATAGTTCATGCATTTGCTGCAAGAAGATACAGATATTTGAGAAAAAAAGTGTCACCCTTGGGATTGTGCTTCTTCTTGTTCAGCCTGGGCAAGATAAATTGATCAGAGTCCGAGTTGAGAATGCTCTAAAATTTGCAATGAAGAAGCCCAAAACCAGTACAGTGAAGCTTCCCTTTGGCCTTTGTGGATGTCAAGAAGAGAATTCCAAAGGGAGAGAACTTGGAGAGATTGAAGAAGACAGCGGCGATCCATATTATGGAAATGGTTTTGAGAATTCTAGCCAAAAAGTTCAGCTACAGGTACCTTTACCTACTTCCTCTTTTATTGTATCCGTAGATGAATGGCAGACAATTCAATCTGGTGGGGAAGAGATAAAAAAATGGCTATTGAACTCAGATAGTCTTGAGTTTGTAGAGCAGACTGGCCCCAATTCATATAAAGGGGCCCACATGGGTAGAAAGGTTGGAATTGAGAAGCTTAAAGGGTGTGATAAAGGTAATTCTTATCAGTTTGAGCTCCATCAAGATCTGCTAGAACTAATGACTTGTGGGCACAGAAAGATTCTGCAATTTTGTGGTGTTTCTGTCGATGAAAATCATGGGTTATGTGTGGTGACGAAGTTCATGGAAGGTGGTTCAGTTCATGATTTGGTGCTAAAGAACAAGAAGCTCGAGATAAAGGAAATTATTAGAATTGCTGTTGATGTGGCTGAGGGCATCAAGTTTATGAATGATCATGGCGTTTCATACAGGGACCTCAACACACAGCGGATTCTGTTGGATCGCCATGGAAATGCTTGCTTGGGAGATATTGGTATAGTCACTGCTTGCAAAAATGTTGGCGAGGCAACGGAGTATGAAACTGATGGTTACCGGTGGCTGGCTCCAGAGATAATTGCAGGTGACCCCGAGAGTGTGACAGAGACATGGATGAGTAATGTTTACAGTTTTGGCATGGTCCTCTGGGAGATGGTTACTGGTGAAGCAGCCTATTCTGCATATTCACCAGTTCAGGCGGCAGTGGGCATAGCTGCTTGCGGCCTCAGACCTGAGATCCCAAAAGACTGTCCTCAGAGTCTGAAAACCCTCATGACCAAGTGCTGGAACAATCAACCTTCAAAACGCCCTCAGTTCTCTGAAATATTGGCTACACTCTTGCGTTCAAACAATACCAATAGGTAA 1761 0.4532 MAAALECWSSRASTDEEMVEQVLMRTQDRSEGETTSESSSAAAGGLKETSQMQKKFQRLSRNVTEAIALFKNSLNLDSARDSAPPSKVDNSRKVVWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAGFDMKDVFLHIKLMEQASVDDQPAILIQEEPDNEIQGCIFKLTFSCHSPISWPSMSSALDSSCICCKKIQIFEKKSVTLGIVLLLVQPGQDKLIRVRVENALKFAMKKPKTSTVKLPFGLCGCQEENSKGRELGEIEEDSGDPYYGNGFENSSQKVQLQVPLPTSSFIVSVDEWQTIQSGGEEIKKWLLNSDSLEFVEQTGPNSYKGAHMGRKVGIEKLKGCDKGNSYQFELHQDLLELMTCGHRKILQFCGVSVDENHGLCVVTKFMEGGSVHDLVLKNKKLEIKEIIRIAVDVAEGIKFMNDHGVSYRDLNTQRILLDRHGNACLGDIGIVTACKNVGEATEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVLWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQSLKTLMTKCWNNQPSKRPQFSEILATLLRSNNTNR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0781 586 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 578 - -
Acco05g0781 586 Gene3D Transferase(Phosphotransferase) domain 1 323 584 - -
Acco05g0781 586 SUPERFAMILY Protein kinase-like (PK-like) 339 578 IPR011009 -
Acco05g0781 586 ProSiteProfiles Protein kinase domain profile. 328 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0781 586 MobiDBLite consensus disorder prediction 23 49 - -
Acco05g0781 586 PRINTS Tyrosine kinase catalytic domain signature 435 453 IPR001245 GO:0004672|GO:0006468
Acco05g0781 586 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Acco05g0781 586 PRINTS Tyrosine kinase catalytic domain signature 399 412 IPR001245 GO:0004672|GO:0006468
Acco05g0781 586 PRINTS Tyrosine kinase catalytic domain signature 549 571 IPR001245 GO:0004672|GO:0006468
Acco05g0781 586 MobiDBLite consensus disorder prediction 33 49 - -
Acco05g0781 586 Pfam Protein tyrosine and serine/threonine kinase 347 578 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0781 Acco-ChrAcco05 12965028 12970291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0781 320 578 MAP Kinase Kinase Kinase AT2G17700 33.333 2.30e-48 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Acco05g0781 PK_Tyr_Ser-Thr 2.5e-41 CL0016