Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0777 ATGGGATTAGCTTATTGCCTTGAGTACATGCATCATCAACCAACCCCTCCTATTGCTCACACAAACCTACAATCTTCATCTATATGCCAAACTGAAGACTGTGCTGCAAAAATAACAGATCTTAGTTTTTGGAATGACATTGTTGCTTCCATGAAACGGGGTTCTTCCACGGCCACGCGGCTCTTGGGGACACCATTGGCATACACAAAGGGCAATGTTTATGGCTTTGTATTAATTCTTTTTGAACTGATAACAGGTAAGATTCCATTTATAGGGGACAATGGGATTCTCACAGATTGGGCAGCTGAGTATCCAAGATGGGGTAAGAAGCCCTTTATTGATGTGGTGGACCCCACTCTAATCAATCTGATAGAAGAAGAGATTGAGAAGTGGTTCCAAGTTGTGAAAGAATGTGTGAATTCTGACCCCGAGAAAAGGCCTACTATGAGAGAGGTTACTGCTGCTTTGAAGGAAGTTACAGCAATGGAGCCTGGTGAAGCTACACCAAAATCATCTCCTCTTTGGTGGGCAGAGCTAGAAATTATGTAA 549 0.4281 MGLAYCLEYMHHQPTPPIAHTNLQSSSICQTEDCAAKITDLSFWNDIVASMKRGSSTATRLLGTPLAYTKGNVYGFVLILFELITGKIPFIGDNGILTDWAAEYPRWGKKPFIDVVDPTLINLIEEEIEKWFQVVKECVNSDPEKRPTMREVTAALKEVTAMEPGEATPKSSPLWWAELEIM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0777 182 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Acco05g0777 182 PANTHER PROTEIN MALE DISCOVERER 2 1 182 - -
Acco05g0777 182 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0777 182 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Acco05g0777 182 Pfam Protein tyrosine and serine/threonine kinase 3 155 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0777 Acco-ChrAcco05 12894085 12894633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0777 1 161 Receptor kinase-like Gene Family AT1G55610 29.775 2.56e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco05g0777 PK_Tyr_Ser-Thr 9.5e-06 CL0016