Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0776 ATGCGTGGTTTGAAGCTCACTGAACGGTTTAAGAGCACACAAGTTCACGCCCTTAATTCTTCAGACACCAGTGAAATTAGTGAAATCTCTAAGCGAAGTAGATATCGAATCCAATCATATGGATCAAAACCTAAATCCAGAATCAACTCATTCTCAGAAATTGACAAGAATCTTCCTTTCCCACTACCTTCCTCCGACTCAATCGAACCCTCCATTGACCCTTACCTTAAACCCATCAATCTCACCGAGACTTTGTCTGACCTCTATTCCCGCCTAGAAAATTGCCCACAGTTCCAGAAATCATTGCTCTGTATCGAACAGTACTCTCTTCTCCGCGGCCTCGGTGACCAGAAGCTGCTTCGTCGATGTCTCCGGACAGCCCGACAGAACGCCGACGATATTCCGACAAAGATTGTGCTTTCGGCTTGGCTAAGGTTCGAAAGGAGGGAGGATGAATTCGTTGGTGTCTCTTCGATGGATTGTAATGGGTACATTCTAGAATGCCCAAAGGCCAATTTAGTATCTGGGTATAGTCCCTGTTTGGTTACAAGTCGTTGCCAGTGTCTCCATCAGCCAAATCAGGACTTTATTACCATTTCAGAGGAAAGTGTGAGTTTACTTGATGAAGAAAGTGATGTTTCGTTTTGTATTGGCAACGAGGAAATTAACTGCGTTCGTTACAAAATGGCAGCTTTATCAGAACCCTTTAAGGCTATGCTTTATGGTGGTTTTGCAGAGTCCCAAATGAGAAAGATTGAATTTTCACTAAATGGGATAAGTCCAGAGGCGATGAGAGCAGTGGAAATTTACACCAGAACTAAAAGGTTGGACCTTTTCTGTATTGAGACTGTTTTGAAGCTATTAACTTTCTCTAATAGGTTCTGTTGCGAGGAAATGAAGTCTGATTGTGATGTCTATTTGGCCTCAAGTTTTGGAAATCTTGAAGATGCATTAATACTCATTCACCATGGATTAGAAGAGAGAGCTTCCCTTCTTGTGGGGTCATGTTTACAGGTATTACTTAGAGAATTGCCAAATTCTTTGTATAATTCTAGAGTTAGCAAACTCTTTTGTAGCTCTGAGGCTAAGGAAAGTTTGGCTTCAGTTGGGTATGCTTCTTTCTTGTTGTACTATTTCCTAAGCCAAGTAGCTATGGAAGAAAGCATGGCATCTAAAACAACACTCATGTTACTAGAAAGATTAGGAGAATTTGCTGTGGAAAAATGGCAGAAGGCTCTTGCATTTCATCAGTTAGGCTGTGTGTTGCATGAGAGGAAAGAATATAAGGAGGCACAACATTACTTCGAAGCATCGGCTGAGGTGGGTCATGTTTATTCTATGGCTGGTGTGGCTAGAACAAAGAACAAGCAAGGTCAACCATATTCAGCTTACAAGTTGATAAGCTCTATCATATTTGAGTATAAACCAGCTGGGTGGATGTATCAGGAAAGGGCTTTGTATAATATAGGAAAGGAGAAGAGTTTTGATTTGGATTTCGCTACTGAATTGGATCCTTCACTTTCATTTCCTTATAAATACAGAGCTCTGGCTAAGGTGGAGGAGAAGCAGATAAAGGCAGGGATTTCAGAACTGGACAGGATTATTGGATTTAAACTCTCCCCGGGTTGCCTTGAATTGAGGTGTTGGTTGTTTATTTCGGTCAGGGATTATAAAAGTGCCATGAGAGATGTTCGAGCATTGTTAACTTTAGAACCAAATTTTGTAACATCACATGGGAAGATCAAAGCAGAATACTTGCTTGTGCTTCTCACCCGAAAGGTTCAGTCAAAGAGTCTAGCAGACCTCTGGATGCAGCTATATGAACAATGGTCAGCTGTTGATGATATCGGTTCGCTGGCTATTATACATCAGATGCTGGAAAATGAACCGGGAAACAGCCTTCTACAGTTTCGTCAGTCTCTACTCCTTTTAAGGTTAAACTGTCAAAAGGCTGCAATGCGTTGTCTTCGGTTGGCTAGAAACCATTCTAGTTCCATGCAAGAGAGGCTAATATATGAAGGTTGGATTATCTATGATACTGGCTATCGAGAAGAAGCTCTGGCTCGGGCTGAGAGGTCCATTTCTATTCAAAGATCATTTGAAGCCTTTTTTCTTAAAGCATATGTATTGGCGGATGCTAATCCCGACCCCATATCTTCTTCAAACATCATCCAACATCTAGAGGAAGCTCTTAAATGTCCTTCAGATGGGCTTCGTAAAGGACAAGCGTTGAATAATCTTGGTAGTATTTTAGTTGATTGTGGTAAGCTAGACCTCGCGAAAGAATGCTACACAAATGCCCTTGCTATTACACACACAAGAGCTCATCAAGGCCTGGCACGCATTTATCATCAGAAAAATCAGCGTAAATCAGCATTTGATGAAATGACAAAGCTGATTGAGAAGGCGGTGAACAATGCCTCAGCATATGAGAAACGATCAGAATACTCGGATCGTGAGATGGCAAAGTCTGATCTTGATGTAGCGACACAACTAGATCCTTTAAGGACATATCCGTACAGATACAGAGCTGCAGTTATGATGGATGAGCAAAAAGAAACTGAAGCTGTGGATGAACTCACCAAGGCTATAAACTTCAAGCCTGATCTGCAAATGCTTCATCTGAGAGCAGCATTTTATGAGTCCATGGGCGATCTGGCATCGGCTCTTCAAGATTGCCAAGCAGCTCTTTGCTTGGATCCAAATCATACGGACACGCTTAATCTGTACCGGAGGACACAAAAGTCGAGCTAG 2754 0.4194 MRGLKLTERFKSTQVHALNSSDTSEISEISKRSRYRIQSYGSKPKSRINSFSEIDKNLPFPLPSSDSIEPSIDPYLKPINLTETLSDLYSRLENCPQFQKSLLCIEQYSLLRGLGDQKLLRRCLRTARQNADDIPTKIVLSAWLRFERREDEFVGVSSMDCNGYILECPKANLVSGYSPCLVTSRCQCLHQPNQDFITISEESVSLLDEESDVSFCIGNEEINCVRYKMAALSEPFKAMLYGGFAESQMRKIEFSLNGISPEAMRAVEIYTRTKRLDLFCIETVLKLLTFSNRFCCEEMKSDCDVYLASSFGNLEDALILIHHGLEERASLLVGSCLQVLLRELPNSLYNSRVSKLFCSSEAKESLASVGYASFLLYYFLSQVAMEESMASKTTLMLLERLGEFAVEKWQKALAFHQLGCVLHERKEYKEAQHYFEASAEVGHVYSMAGVARTKNKQGQPYSAYKLISSIIFEYKPAGWMYQERALYNIGKEKSFDLDFATELDPSLSFPYKYRALAKVEEKQIKAGISELDRIIGFKLSPGCLELRCWLFISVRDYKSAMRDVRALLTLEPNFVTSHGKIKAEYLLVLLTRKVQSKSLADLWMQLYEQWSAVDDIGSLAIIHQMLENEPGNSLLQFRQSLLLLRLNCQKAAMRCLRLARNHSSSMQERLIYEGWIIYDTGYREEALARAERSISIQRSFEAFFLKAYVLADANPDPISSSNIIQHLEEALKCPSDGLRKGQALNNLGSILVDCGKLDLAKECYTNALAITHTRAHQGLARIYHQKNQRKSAFDEMTKLIEKAVNNASAYEKRSEYSDREMAKSDLDVATQLDPLRTYPYRYRAAVMMDEQKETEAVDELTKAINFKPDLQMLHLRAAFYESMGDLASALQDCQAALCLDPNHTDTLNLYRRTQKSS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0776 917 Gene3D Tetratricopeptide repeat domain 818 917 IPR011990 GO:0005515
Acco05g0776 917 SMART tpr_5 412 445 IPR019734 GO:0005515
Acco05g0776 917 SMART tpr_5 870 903 IPR019734 GO:0005515
Acco05g0776 917 SMART tpr_5 741 774 IPR019734 GO:0005515
Acco05g0776 917 SUPERFAMILY TPR-like 725 908 IPR011990 GO:0005515
Acco05g0776 917 Gene3D Tetratricopeptide repeat domain 596 817 IPR011990 GO:0005515
Acco05g0776 917 Coils Coil 793 813 - -
Acco05g0776 917 SUPERFAMILY POZ domain 209 308 IPR011333 -
Acco05g0776 917 ProSiteProfiles TPR repeat profile. 870 903 IPR019734 GO:0005515
Acco05g0776 917 Gene3D Tetratricopeptide repeat domain 395 586 IPR011990 GO:0005515
Acco05g0776 917 Pfam Tetratricopeptide repeat 743 773 IPR019734 GO:0005515
Acco05g0776 917 Pfam BTB/POZ domain 209 308 IPR000210 GO:0005515
Acco05g0776 917 SUPERFAMILY TPR-like 412 770 IPR011990 GO:0005515
Acco05g0776 917 SMART BTB_4 211 311 IPR000210 GO:0005515
Acco05g0776 917 ProSiteProfiles BTB domain profile. 211 280 IPR000210 GO:0005515
Acco05g0776 917 PANTHER ETO1-RELATED 1 916 IPR044631 GO:0010105
Acco05g0776 917 Gene3D Potassium Channel Kv1.1; Chain A 206 348 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0776 Acco-ChrAcco05 12888132 12892785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0776 724 914 Glycosyltransferase AT3G04240 30.693 2.59e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco05g0776 BTB 1.1e-06 CL0033