Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0769 ATGGCGTCTCAAGACAATCACTTTCACATCTTCCAATGGCATCTCATTGAAATAAATCACTCAAACTTCCACTCATATGGCCATGGCATCTTCCTCCTACTTTTTTTCTTCTCTATCGTCATTCTGATCGCTGTGTTATTCCTTCTCGCCCACTTTTGTCGCCGGCGGCGAGGTAGCGACGACGCCTCTCACGCGGTCCCTGTGGCCACTAGTTTTCAATGGGGTAAGTTAGAGATGGGATCAATGGAGAATAATAAGAGCGTTGTGGGAGACACTAATGTAGAATGCTGCATATGTTTGAGTGTGTTAAATGAAGGAGGAAAAGTGAAGGTGTTGCCAGAATGTGAGCATGCTTACCATTCAGTCTGTGTGGAGATGTGGTTAAGTGCAAACCCTAGTTGTCCTCTTTGCAGGGCTTCACTTCATAGATTTATGAGTAATGCTATCAACAACAACAACAACGATGTATGA 471 0.4416 MASQDNHFHIFQWHLIEINHSNFHSYGHGIFLLLFFFSIVILIAVLFLLAHFCRRRRGSDDASHAVPVATSFQWGKLEMGSMENNKSVVGDTNVECCICLSVLNEGGKVKVLPECEHAYHSVCVEMWLSANPSCPLCRASLHRFMSNAINNNNNDV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0769 156 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Acco05g0769 156 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 31 140 IPR044675 -
Acco05g0769 156 Pfam Ring finger domain 95 138 IPR001841 -
Acco05g0769 156 SMART FANCL_C_2 92 145 - -
Acco05g0769 156 SUPERFAMILY RING/U-box 90 145 - -
Acco05g0769 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 147 IPR013083 -
Acco05g0769 156 SMART ring_2 96 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0769 Acco-ChrAcco05 12608245 12608715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0769 10 142 C3H Transcription Factor Family AT3G11110 31.915 1.61e-17 73.2