Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0763 ATGGTGAACATGAGCTCTCTACGTGATTCTAATTCTTCAATGGCTTCTTGGGTTCGAGGTCGGTGTTTAGGTAAGGGCTCGTTTGGCACTGTGACGATCGGAGTGAGTAAGTCCGACGGTCGGGTTTTTGCGGTGAAGTCCGTGGATCTTCATTCGGGTCAGGTGGTGGCTTTGGAGAATGAGATTCGGATTCTTCGGAGCATGTCGTCGCCGTACGTGGTGAGCGTTCTCGGCGACGATGCTACGACGTCGTATCGAAACTTGTATTTGGAGTACCTGCCAGGTGGCACCCTCGCTGACCTAGCGTCTCGGGAGAATGGCGGGAGATATGATGACGTGGACGAGCGGGTGGTGAGGTACTTCACCTGGTGTATGGTGAATGCGCTGAGGTATGTTCACGCGAGGGGCATAGTCCATTGCGATGTCAAAGGGAGGAACGTTCTGGTCGGGCTCAATGGCGGCGTGGCCAAGCTCGCCGACTTCGGCTCGGCGGTGGAGCAGTGCTCCTCCGGTGCGGTGGCGGTGGAGATCGTGCCACGTGGTAGTCCGTTGTGGATGGCGCCAGAGGTGATTCGGAGGCAGTGCCAGGGACCGGAATCTGACGTGTGGTCCTTAGGATGCACGGTGATTGAGATGGTCACGGGAAAGCCAGGCTGGGATGATGACGAAGGATTTAACACTCTGAGTCGAATCGGATACTCCGATGAGTTGCCGGAGTTTCCCAGTCAATTGTCAGAACTCGGACGCGACTTCCTAGGCAGGTGCCTGAGTAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGTTGCAGCATCCATTCTTGCTTCCTACTCCTCCTAATAAGCTCGCAGATTCGTCTCCTCGGTGCATCCTCGATTGGATAAGCTCAGACGAATTCAAGGAAGAAGACGAAGAAGAAATCAGGATGAACAATGAAACCTCAGCGAATGAGAGAATCGGTAAATTAGCTTCAAATTCAAGGGTAAATTGGGAAGTTGAGGATGATTGGTTGGAGGTGAGGGCATTGGGGTCCAACAGAGAATCAACAGTTCCACTCACTAGTGGGAGGGAAGACGAAGATGAAGGGACAAGTTCGGAATATGAGGATTTGAGGATGGTAGAAAAGGGAATAGAATTGAGGATAATGAGGGAATATTCGATAACGGGAAGGGCAAATGTGGGAATATGGAATTGGGTCGAGGATCACAGCGAAAATGATTGGAGATATGGGTATGGGCTGCACAAGTTGGATCTGTTGAGAAAGATAAGGGCAATAACATTCATTTGCAGCTTGTGGTGTTATTGTTGGTGTACTTTGATATTAAAAATTATTTTCTTATTTCAAGTACATTTAAATATATTACTTTATCCCTCCCTCTCTTTTATTCAATCCAGCTGA 1401 0.4989 MVNMSSLRDSNSSMASWVRGRCLGKGSFGTVTIGVSKSDGRVFAVKSVDLHSGQVVALENEIRILRSMSSPYVVSVLGDDATTSYRNLYLEYLPGGTLADLASRENGGRYDDVDERVVRYFTWCMVNALRYVHARGIVHCDVKGRNVLVGLNGGVAKLADFGSAVEQCSSGAVAVEIVPRGSPLWMAPEVIRRQCQGPESDVWSLGCTVIEMVTGKPGWDDDEGFNTLSRIGYSDELPEFPSQLSELGRDFLGRCLSREPSERWSCDQLLQHPFLLPTPPNKLADSSPRCILDWISSDEFKEEDEEEIRMNNETSANERIGKLASNSRVNWEVEDDWLEVRALGSNRESTVPLTSGREDEDEGTSSEYEDLRMVEKGIELRIMREYSITGRANVGIWNWVEDHSENDWRYGYGLHKLDLLRKIRAITFICSLWCYCWCTLILKIIFLFQVHLNILLYPSLSFIQSS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0763 466 CDD STKc_MAPKKK 16 275 - -
Acco05g0763 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Acco05g0763 466 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Acco05g0763 466 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0763 466 SMART serkin_6 17 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0763 466 SUPERFAMILY Protein kinase-like (PK-like) 15 309 IPR011009 -
Acco05g0763 466 FunFam Serine threonine protein kinase putative 15 324 - -
Acco05g0763 466 ProSiteProfiles Protein kinase domain profile. 17 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0763 466 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 10 355 - -
Acco05g0763 466 Gene3D Transferase(Phosphotransferase) domain 1 8 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0763 Acco-ChrAcco05 12535139 12536539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0763 11 370 MAP Kinase Kinase Kinase AT1G07150 53.100 2.98e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco05g0763 Pkinase 8.4e-54 CL0016