Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0760 ATGTCGTGCTCCGTCGCCGTCTGTAAATCTCCGGTCTTCTCTCCGTCGTCTTCCCTCTTCTGCAACAAACCCTCCATCGTCATCTCTTCCTCGCCGGAATCCCTTTCTCTCTCTTTGTCTCACCTCAAGCCTTCAGCTTCTGCTTCATCTTCTTCTTCTTCGCCTTCCTCGCCTTCCTCGCCTTTCCGCCTCCGCCTCCTCAAGCCTCCTCCTCCTCCTCCTACCGCCCTTTCCAATTCCGCCTCTGCCTCCGCGTCCGCTCCTTCCTCCTCTTCCACCTCGCCTAACGGTGCCGTTTTGAAGAGGAAGAGGCCCGCAAGGCTTGCTATTCCCGTCTCGTCTCTCTCTTTTGGGGTTCCGGCGACGCCGTCTTCCTCGGTGGTGGCCCGAGATGTTCTAGAGGCCGAAGGGCTTGGGTTCTCCGTATATTGTAAGAGAGGTCGGCGAGAGTACATAGAAGATCGTTATTCTGCCGCGGTCAATCTTAAAGGACAACCCAAACAGGCTTTCTTTGGCATATTTGACGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCAGCACAAAACTTAGAGAAGAACGTCATGGATGAAGTGACAAGAAGAGATGAAGATGATGACATAGAGGAGGCAGTGAAACACGGTTACCTGAACACTGATTCTGATTTCTTAAAAGAGGACCTCCATGGTGGATCCTGCTGTGTAACAGCACTGATCAGGAATGGAAACCTCGTTGTCTCTAACGCGGGCGATTGCCGTGCTGTTATTAGCCGAGGCGGTGTCGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAAGTACAGAATTGAAACCACAGGTGGCTATGTTGATCTATGCCGTGGGGTTTGGAGGATTCAGGGGTCCTTAGCCGTTTCCAGAGGAATTGGAGATCGGTATTTGAAGCAATGGGTGATAGCTGAACCTGAGACTAAAGTTCTCAGGATTGCACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTGGTAACCAGGAAGCTGTGGATATTGCTCGTAATATGGCACAGCCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCATATGATGACACAAGTGTTATGCTGGTTAAACTGGGACACTTTATTTAA 1170 0.4991 MSCSVAVCKSPVFSPSSSLFCNKPSIVISSSPESLSLSLSHLKPSASASSSSSSPSSPSSPFRLRLLKPPPPPPTALSNSASASASAPSSSSTSPNGAVLKRKRPARLAIPVSSLSFGVPATPSSSVVARDVLEAEGLGFSVYCKRGRREYIEDRYSAAVNLKGQPKQAFFGIFDGHGGSKAAEFAAQNLEKNVMDEVTRRDEDDDIEEAVKHGYLNTDSDFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKYRIETTGGYVDLCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIAPEHDLLILASDGLWDKVGNQEAVDIARNMAQPLMACKKLVDLSVSRGSYDDTSVMLVKLGHFI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0760 389 ProSitePatterns PPM-type phosphatase domain signature. 170 178 IPR000222 GO:0043169
Acco05g0760 389 SUPERFAMILY PP2C-like 137 386 IPR036457 -
Acco05g0760 389 Gene3D - 137 388 IPR036457 -
Acco05g0760 389 PANTHER PROTEIN PHOSPHATASE 2C 74 384 IPR015655 GO:0004722|GO:0006470
Acco05g0760 389 SMART PP2C_4 129 383 IPR001932 -
Acco05g0760 389 FunFam probable protein phosphatase 2C 25 132 388 - -
Acco05g0760 389 Pfam Protein phosphatase 2C 141 377 IPR001932 -
Acco05g0760 389 CDD PP2Cc 139 385 IPR001932 -
Acco05g0760 389 MobiDBLite consensus disorder prediction 44 61 - -
Acco05g0760 389 ProSiteProfiles PPM-type phosphatase domain profile. 139 385 IPR001932 -
Acco05g0760 389 MobiDBLite consensus disorder prediction 78 98 - -
Acco05g0760 389 MobiDBLite consensus disorder prediction 44 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0760 Acco-ChrAcco05 12422383 12424263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0760 1 389 PP2C-type Phosphatase Gene Family AT2G30020 64.532 6.68e-167 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1261 10 26531856 26533521 Acco05g0760 05 12422383 12424263 CCT
Acco05g0760 05 12422383 12424263 Acco05g0760 05 12422383 12424263 ECH
Acco10g1261 10 26531856 26533521 Acco05g0760 05 12422383 12424263 ECH