Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0744 ATGGAAGATACACCTTCTTCTTCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTTTCAACTTCTCAACTTCAAGCAGAGGAAGCTGAGAATACAAATGAACAGAATCATCAACAACCACTTCATAATTCTCTGTCATATAGGGCTAACATTTCCATGGCCAATCCTCATCTTGCTGCTATTAGGGGTGATGTCTGCTCTTGCCTCATCATTCTCATCACTTTTTGGTTGGTCGCAACAATGGGTCTGATTGCTGGTATTTACGGCACAACAACTTTGCAACTAGGTCCTTACTCATCAATTTTAATACAAGTCAACTCAATCTTTGTACAGTCTATCAAGGAATGGATATTCTACCTCAACAGACAGTCTCAGTTAGATATCTTCTATGATGTAAAGTCCGCAAGATTCTCACAGTTATCTCTTGTAATTGCTCAAGGTAGAGAAGAGCTTCTTAGGTGGATAGAGATGCCCTCATTTCCTAACACAACATTATCTTGGAATATTATTTATGGGAGGGACAAGATCACACAGAAAATATCAGATCCATTTTCTTATTATGTAGCACTTGGTAACTTGCACACTCAAGATGTGGAGGTGGAATTGAAGTTCAGTGTGAGTTCAGTTGTGTACAATACAAGCAGTGCAAGCAGGAGATGTTCATCAGATAGCAGTTTGTGTAGATTACAGCTTTTTCTTTCACAGTCTGGCTCTGCAGTATTGACTACCCCACCTCCTGCACAGGGTAATTTTGAGGATGAATGGTATCAAGTGAAACTGTCATATACACCAAGGTGGACCACTTACTTTGTAGCATCAGGTATGGTGACTGTACTAATCTTCTTCATCTTGAGAAGCTGCAATGGGTTCCAAAGATATGATTCAGAGACAGAAAGCTTGCAACAGGTTAATCATCGTGTTATTTCAGAACGATCACCGTTGCTGGCTAACAAAAACGACGACGCTCTGAGCTTGGGTTCGTCTTATGAGTCCTTCACTAGTGAGGAAGAAGATGTGACTGGAAAGCCATTAATGAAGGAAGGAGGAGAAGCTGAGAATAGTATGAAGCATTTGTGTGTGATTTGTTTTGATGCTTTAAGGGATTGCTTCTTTCTTCCATGTGGCCATTCTGCAGCTTGCTTTCAATGTGGAAGAAGGGTTGTTGAGGAAGCCAATCCTTGTCCCATATGCAGAAGGAAAATTAAGAAAGTGCGAAAAATTTTTACTGTTTAA 1233 0.4079 MEDTPSSSLPPPPPPPPPVSTSQLQAEEAENTNEQNHQQPLHNSLSYRANISMANPHLAAIRGDVCSCLIILITFWLVATMGLIAGIYGTTTLQLGPYSSILIQVNSIFVQSIKEWIFYLNRQSQLDIFYDVKSARFSQLSLVIAQGREELLRWIEMPSFPNTTLSWNIIYGRDKITQKISDPFSYYVALGNLHTQDVEVELKFSVSSVVYNTSSASRRCSSDSSLCRLQLFLSQSGSAVLTTPPPAQGNFEDEWYQVKLSYTPRWTTYFVASGMVTVLIFFILRSCNGFQRYDSETESLQQVNHRVISERSPLLANKNDDALSLGSSYESFTSEEEDVTGKPLMKEGGEAENSMKHLCVICFDALRDCFFLPCGHSAACFQCGRRVVEEANPCPICRRKIKKVRKIFTV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0744 410 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g0744 410 Pfam Domain of unknown function (DUF4792) 111 151 IPR032008 -
Acco05g0744 410 SUPERFAMILY Formin homology 2 domain (FH2 domain) 10 184 - -
Acco05g0744 410 Pfam Zinc finger, C3HC4 type (RING finger) 357 404 - -
Acco05g0744 410 PANTHER OS05G0521000 PROTEIN 42 114 - -
Acco05g0744 410 Pfam Domain of unknown function (DUF4793) 176 282 IPR032010 -
Acco05g0744 410 SUPERFAMILY RING/U-box 358 404 - -
Acco05g0744 410 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 336 410 IPR013083 -
Acco05g0744 410 MobiDBLite consensus disorder prediction 1 41 - -
Acco05g0744 410 MobiDBLite consensus disorder prediction 22 41 - -
Acco05g0744 410 ProSiteProfiles Zinc finger RING-type profile. 359 398 IPR001841 -
Acco05g0744 410 SMART ring_2 359 397 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0744 Acco-ChrAcco05 11991822 11998473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0744 359 407 C3H Transcription Factor Family AT3G06140 38.776 1.11e-06 48.5