Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0670 ATGGATATTCTCTCATCATCATCATCATCTTCACATATCTCCAATAATCCCACTTGGCTAATTCAAGACGCCATGAACACAAGAACAACAAAATGGACTCCATCAGAGAACAAAATGTTCGAGAATGCTCTCGCCGTGTACGATAAAGACACACCAGATCGGTGGGTGAAAGTTGCAGCAATGATTCCAGGGAAGACAGTAGGAGATGTGATTAAGCAGTACAGAGAATTAGAAGAAGATGTTAGTAACATAGAAGCTGGATTGGTCCCAATTCCAGCAGGTTATTATAATAGTAGTGTTAGCACTGCCGCCGCCACGACGATGACCTCGCATCATCAATTCACCTTAGATTGGGTTAATTCTTCTGGATTTGATGGCTTCAAATCACATGGTGGAAAGAGATCCTCATCATCTTCAGCAGGAAGACCCCCTGAACAAGAAAGAAAGAAAGGTGTCCCATGGACAGAAGAAGAACACAAACTGTTTCTGCTGGGATTGAAGAAGTATGGGAAAGGTGATTGGAGGAACATATCGAGGAATTTCGTGGTGACTCGGACGCCGACTCAGGTGGCGAGCCACGCGCAGAAGTACTTCATAAGGCAACTTTCAGGAGGGAAAGACAAGAGAAGAGCAAGCATTCATGATATAACAACAGTGAATCTGTCAGAAACCACAAGAACACCTTCTTTAGAAGACATAAAAAATGGAGGTAACTCGAAGCAGGAGGCGAATCCAAGTGCTTCTGCTGCTTTAGGTCAAGCACATTTTCAATGGAACCAGCAGGCAACAAATGCAGGAGCTATGGGGTTTAATGTTCCTTATGTGGTCAATAATAACTCTTATGGGATAAAAGTGCAGGGCCAAAATCTGCATACAAGTGCTCTTCTTAATAATCATCATGATTCTTCTTCTTACTTTGGATCACCTCAAACTCAGAACAATATGGTTTTCCAAATGCATAATTCTACTTCTGCTCACCACTTTTCTCATGTTTGA 996 0.4227 MDILSSSSSSSHISNNPTWLIQDAMNTRTTKWTPSENKMFENALAVYDKDTPDRWVKVAAMIPGKTVGDVIKQYRELEEDVSNIEAGLVPIPAGYYNSSVSTAAATTMTSHHQFTLDWVNSSGFDGFKSHGGKRSSSSSAGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSETTRTPSLEDIKNGGNSKQEANPSASAALGQAHFQWNQQATNAGAMGFNVPYVVNNNSYGIKVQGQNLHTSALLNNHHDSSSYFGSPQTQNNMVFQMHNSTSAHHFSHV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0670 331 CDD SANT 153 198 IPR001005 -
Acco05g0670 331 FunFam transcription factor MYB1R1 152 203 - -
Acco05g0670 331 SUPERFAMILY Homeodomain-like 30 85 IPR009057 -
Acco05g0670 331 ProSiteProfiles SANT domain profile. 154 202 IPR017884 -
Acco05g0670 331 SMART sant 28 80 IPR001005 -
Acco05g0670 331 SMART sant 150 200 IPR001005 -
Acco05g0670 331 Gene3D - 24 91 - -
Acco05g0670 331 FunFam Transcription factor SRM1 24 91 - -
Acco05g0670 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 149 201 IPR006447 GO:0003677
Acco05g0670 331 ProSiteProfiles Myb-like domain profile. 146 198 IPR001005 -
Acco05g0670 331 MobiDBLite consensus disorder prediction 129 153 - -
Acco05g0670 331 Gene3D - 152 202 - -
Acco05g0670 331 MobiDBLite consensus disorder prediction 227 248 - -
Acco05g0670 331 CDD SANT 31 77 IPR001005 -
Acco05g0670 331 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 28 298 IPR043363 -
Acco05g0670 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 202 IPR017930 -
Acco05g0670 331 Pfam Myb-like DNA-binding domain 153 198 IPR001005 -
Acco05g0670 331 SUPERFAMILY Homeodomain-like 147 201 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0670 Acco-ChrAcco05 9862122 9863293 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g0670 Myb_DNA-binding 1.6e-12 CL0123