Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0619 ATGGTGTTTCAACCGCCTACTTTCCCTTATTCGTCTCCTTCCTCACGTTCAAGTAGTATCACTTCACTAGACGGTAACAACAACTATATGGATCGTGCAATGTCATTGTACCCTATCAACAACCAAAACCTTTACAATATCATTAACAATGATTCAAAACATTATGTTGATTATCTCAATTCTTTTCCACCTGGATATCGATTCAACCCTACTGAAGAAGAACTCATCATCTTTTATCTCATGAAGAAAGTGAGGCAGGAGCGTTTGCCACCAAATCAGATGTTCGACGTTGATGTATATCAGTATGACCCTGAAATTGTTTACACTCACAAGAGTGTTGAGGATCAAAAAGAATGGTATTTTTTCTCGCCAAGGGAAAGAAAATATAAGAATGGAGAGAGGCCAAAGAGATCAACACAAGATGGGTATTGGAAGGTTTCAGGATCAGATAAATTGATTGTTTCCAACGGAATCCTCGTTGGAAGGTGGAATACGTTGGTTTATTATAGAGGGAAGGCTCCAACGGGAAGAAAGACGAATTGGATAATGCGTGAGTATAAACTTGCACATCATTCTCATAAAAGAACCAGTAATATTGACATGACGTTGGATGATTATGTTTTATGCAAAATTTATAAGAAGGCTGAAGTCAACTCGAAAAGCAAAAGCAAAGGAATGAAAAAGGAGGAACAAGAAGAAGAATTTGGAGAAGTTATCACCCAATACCAACGTAATGGATATAACCCGTCATATTCAAATAGTATAAATCAACTCAATTATAAATATGATTCATCATGCCTAGAATTACCTGGAGATCATCATTACTTTAATCATCAAGCTCAGCAATCAGGTGATCAAAATAATATGCTTCCTTGGGACAATGAACGTTATCAGGAGATCTTGATGGAATTGCAGACTGTGGTTGATGATGATACTTATAATAATGGGACATTTTCTGTAGAGAACCTAGGTCATGTTTAA 981 0.366 MVFQPPTFPYSSPSSRSSSITSLDGNNNYMDRAMSLYPINNQNLYNIINNDSKHYVDYLNSFPPGYRFNPTEEELIIFYLMKKVRQERLPPNQMFDVDVYQYDPEIVYTHKSVEDQKEWYFFSPRERKYKNGERPKRSTQDGYWKVSGSDKLIVSNGILVGRWNTLVYYRGKAPTGRKTNWIMREYKLAHHSHKRTSNIDMTLDDYVLCKIYKKAEVNSKSKSKGMKKEEQEEEFGEVITQYQRNGYNPSYSNSINQLNYKYDSSCLELPGDHHYFNHQAQQSGDQNNMLPWDNERYQEILMELQTVVDDDTYNNGTFSVENLGHV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0619 326 Gene3D NAC domain 71 219 IPR036093 GO:0003677|GO:0006355
Acco05g0619 326 PANTHER NAC TRANSCRIPTION FACTOR 56 62 263 - -
Acco05g0619 326 ProSiteProfiles NAC domain profile. 62 214 IPR003441 GO:0003677|GO:0006355
Acco05g0619 326 Pfam No apical meristem (NAM) protein 63 188 IPR003441 GO:0003677|GO:0006355
Acco05g0619 326 MobiDBLite consensus disorder prediction 1 23 - -
Acco05g0619 326 SUPERFAMILY NAC domain 58 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0619 Acco-ChrAcco05 8936239 8938555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0619 57 266 NAC Transcription Factor Family AT3G04070 43.836 1.34e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco05g0619 NAM 8.7e-29 No_clan