Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0569 ATGGAAATAGAGCAAGACACTTCTTTGGCCTCCTGTAATGGAGGCAGAAGCAATGAGAGAGGATTGTATCTGGTGTGGGAGGATTTAGCTGTGGTGGTTCCGAACTTCGGCAATGGACATACTAGGAGATTGCTTGATAGGTTGAATGGATATGCTGAGCCTAACAGAATCATGGCAATCATGGGACCTTCTGGTTCTGGCAAATCCACTCTTCTTGATGCTTTGGCAGGTAGGCTTCCTGGAAATGTTGTCATGACTGGGAATGTGCTTTTAAATGGAAAGAAGAGAGCAGACCATGGAGTTAAAGCTTATGTGACCCAAGAAGACATATTATTGGGAACACTAACAGTGAGAGAGACAATATCATACTCAGCAAAACTAAGGCTTCCAAGCACAATGACAAAAGAAGAGGTCAATGACATAGTGGAAGGAACAATAATGGAAATGGGTCTTCAACAATGTGCTGATAGGCTAAATGGGAATTGGCATTTAAGAGGAATAAGTGGTGGGGAAAAGAAAAGACTAAGCATAGCTCTTGAGATCCTCACAAGACCTTCCCTTTTGTTCCTTGATGAACCAACCAGTGGGCTAGATAGTGCCTCTGCATTTTTTGTTGTTCAGACTCTGAGAAATATTGCTCATGATGGAAGAACTGTTATCTCCTCCATACATCAACCAAGCAGTGAGGTTTTTGCACTCTTTGACGATCTCTTTCTTCTCTCTGGTGGTCAAACTGTGTTCTTTGGAGCAGCTAAAATGGCAGTTGAGTTCTTTGCCAATGCAGGATTTCCATGTCCAAGTAGAAGAAATCCATCAGATCACTTCCTTCGTTGTGTCAATGCAGATTTTGACAGAGTCACCATGACTATGGTGGCTTCTCAGAAAATACCTGAACAAGATAATTTATCAACTGCAGAAATAAAAACAGTACTTGTTGAGAAATACCAATGGTCAGAATATGCTACCACAGCAAGAGCAAGAATAAAAGAAATCTCAAATACTGGACGAGAGGAGAGTGAAAGTGAAAGCAAGAAACAAACCAAATGGTGGAAGCAGCTGTCAACATTGACTCAGAGATCTTTTGTGAACATGAGTAGAGATGCTGGATACTACTGGATAAGGATCATAATCTATGTGGCCTTATCTTTTTGTGTTGGAACTGTCTTTTTCAATGTTGGGACAAGTTATAGGGCAATTTTTGCCAGAGGATCTTGTGGCGCTTTCATATCTGGTTTCATGACATTCATGTCCATTGGTGGCTTCCCATCTTTCATAGAAGAGATGAAGGTGTTTAAGAAGGAGAGGCTAAATGGGTATTATGGCAATGGAGTCTATGTTCTCTCAAACTTTCTGTCATCCCTCCCTTTCGTGTTTGTGATGTCTTTTGCTACTAGCATTATAACCTTCTTCATGGTTAAGTTTCATCCTGGGTTCTCTATTCTTCTTTATGGATGCATCGATCTTTTTTGCTGCATTGCTGTTGTGGAGACCGCAATGATGATTATAGCTTCACTTGTTCCAAACTTCCTAATGGGACTCATAGTCGGAGCAGGATATGTTGGAGTTATGATGATGACTTCTGGATACTTCCGTCTACGTCCTGACCTTCCCAAAGTATTCTGGCGTTATCCAATCTTATACATCAATTTTGGAGCATGGGGATTGCAGGGTGCATACAAGAACGACATGATAGGACTAGAGTTTGAAGCCATGAATCCAGGTGAACCGAAACTGAAGGGAGAAGACATCTTAAGAACAATGCTTGGCATTGAAGTTGATCATTCAAAATGGGGGGACTTAGCTGCAGTGGCAACAATCCTCATATCCTTCAGACTCTTCCTCTTTCTTCTCCTCAAGTTCAGAGAGTTCTCTTCACCTCGGCTTCATAAACTCTACGCCAGACAAACTCTGCATCGCATTGAGAAACGTCCTTCTTTCAGAAAAGCTGCCGCTTCTTTGTCTTTCCCTTCTAAGAGACACCACCAACCTCTTTGTCCTTTGTCTTCTCAAGAAGGCCTCACCTCCCCAATTCATTAG 2037 0.4192 MEIEQDTSLASCNGGRSNERGLYLVWEDLAVVVPNFGNGHTRRLLDRLNGYAEPNRIMAIMGPSGSGKSTLLDALAGRLPGNVVMTGNVLLNGKKRADHGVKAYVTQEDILLGTLTVRETISYSAKLRLPSTMTKEEVNDIVEGTIMEMGLQQCADRLNGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGQTVFFGAAKMAVEFFANAGFPCPSRRNPSDHFLRCVNADFDRVTMTMVASQKIPEQDNLSTAEIKTVLVEKYQWSEYATTARARIKEISNTGREESESESKKQTKWWKQLSTLTQRSFVNMSRDAGYYWIRIIIYVALSFCVGTVFFNVGTSYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKKERLNGYYGNGVYVLSNFLSSLPFVFVMSFATSIITFFMVKFHPGFSILLYGCIDLFCCIAVVETAMMIIASLVPNFLMGLIVGAGYVGVMMMTSGYFRLRPDLPKVFWRYPILYINFGAWGLQGAYKNDMIGLEFEAMNPGEPKLKGEDILRTMLGIEVDHSKWGDLAAVATILISFRLFLFLLLKFREFSSPRLHKLYARQTLHRIEKRPSFRKAAASLSFPSKRHHQPLCPLSSQEGLTSPIH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0569 678 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524|GO:0016887
Acco05g0569 678 FunFam ABC transporter G family member 11 18 261 - -
Acco05g0569 678 Pfam ABC transporter 45 195 IPR003439 GO:0005524
Acco05g0569 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 267 IPR003439 GO:0005524
Acco05g0569 678 CDD ABCG_EPDR 21 249 - -
Acco05g0569 678 SMART AAA_5 54 243 IPR003593 GO:0016887
Acco05g0569 678 MobiDBLite consensus disorder prediction 654 678 - -
Acco05g0569 678 Pfam ABC-2 type transporter 352 561 IPR013525 GO:0016020|GO:0140359
Acco05g0569 678 MobiDBLite consensus disorder prediction 663 678 - -
Acco05g0569 678 Gene3D - 36 260 IPR027417 -
Acco05g0569 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 643 - -
Acco05g0569 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0569 Acco-ChrAcco05 8098371 8104319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0569 56 238 Calmodulin-binding Proteins AT2G36910 30.198 5.05e-09 57.8