Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0527 ATGGTAAAGCTTACGAGTTGGCGGGTAGATAATCTGTCACTACTCACTACCAATTTAAAATACAAAGAAATACAGCAAAATCTGATGCATTTTCTCGTCTTTCCATCACTTTCTGCCGTCTCTTGCCCTTTTGTATATTCTTGGGATTCAATGGAAAAAGCTTGTACAGATGCAGATACTAGAGTTCGAAGTGATGGAGATTCCTTGTCAGCTTCTGCTCATCATCATCATCTACAGACATGCACAGCAAATGGAAAAGGTGATAATTCTTCCTTGCTTCTGCAGTCCAGACAACCAAGCCTCACCTCTTTGCAGATACCAGTAGGGTCAGTAGAAAGTGTATTATCATCGTCTGCAAAGACAGATGTTGTATCACAGCCAAGTCCAGGTTCTTCACGAGGAGGAGTGCCTCCAAGATCAAATTTAGCCAGAGTCAAGTCTTCCATGAGAAATTTACTTTCTCAGAGGAGTTTTAAGGCAAAAAATTGTTCTCCAGATTGTGAAAGGGAAGTTCTCATTGTTTCTGATATTCCCTCATCAGATGGAGCTTTGGACAAACCTTCAACTTCAAGGTCCCTTTCTTTGAATAAGGTTTTGTTCCCTTCATCAACAAAAGCGTCAAATTCATTACCAGTTACACCAATTGCAAATACAGTTGCAGAGACTGTGCAGGGAAGTCATCTAGCAAGTGATCCTGACTTAATTAAAATGGAAGTCAAGCATCACATGACTCGATCATTTTCAGTTCCAGTTAATATCAAATCCTCTAGTTTAAAGCGAACAGGTTCTAGTGGTTTGATCCGAGTAATTTCAGCAAGACGACATCCTGCAGCTGTTAATGACTGTTCAATTGAAAAAGCTTCAGTACCAGAGATTGCCATTGAAGATGCTACTGAGGACATTCCTGAAGAAGAAGCAGTTTGTAGGATTTGTTTCATGGAGCTGGGGGAAGGTGGGGATACCCTTAAGATGGAGTGCAGTTGTAGAGGAGACCTTGCGCTTGCTCACCAAGAGTGTGCAGTGAAGTGGTTTAGCATAAAAGGAAACAAGACATGTGATATTTGCAACCAGGAAGTCCGAAATCTTCCAGTGACTCTATTGAAAATCCAAAGTCCTAATCCTACTGCCGAACGGTCATCAAATAGCCCACAGCAGATAGAAGTTTCTTTTCACAGGATCTGGCAGGATGTACCAGTACTTGTCTTGGTCAGCATGCTTGCTTATTTTTGCTTTTTAGAGCAACTTCTGGTTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCTCTACCTTTTGCCTGCACCTTTGGCCTTGTTGCTTCTTTGCTTGCTTCGACCATGGTGAGCAGGGATTACATGTGGGCTTATGCTTGCTTCCAGTTTGCAATTGTCATCCTGCTGGCTCATGTATTTTACACCATACGTAAATTAAATGGTGTTCTCTCGGTTATGCTTTCTTCACTTGCTGGATTTGCGATAGCAATGGCCGTAAATTATCTGCTCAAGGTATTTTTAAATTGGAGATTTAGAAGGCAGATACAATCTATTGATCAGACCCTAACAGAGCAGGGACAAGGACAGCATAATAGGCGTCAAAGACAGTTGCAAGAGCAACATCAATAA 1620 0.4173 MVKLTSWRVDNLSLLTTNLKYKEIQQNLMHFLVFPSLSAVSCPFVYSWDSMEKACTDADTRVRSDGDSLSASAHHHHLQTCTANGKGDNSSLLLQSRQPSLTSLQIPVGSVESVLSSSAKTDVVSQPSPGSSRGGVPPRSNLARVKSSMRNLLSQRSFKAKNCSPDCEREVLIVSDIPSSDGALDKPSTSRSLSLNKVLFPSSTKASNSLPVTPIANTVAETVQGSHLASDPDLIKMEVKHHMTRSFSVPVNIKSSSLKRTGSSGLIRVISARRHPAAVNDCSIEKASVPEIAIEDATEDIPEEEAVCRICFMELGEGGDTLKMECSCRGDLALAHQECAVKWFSIKGNKTCDICNQEVRNLPVTLLKIQSPNPTAERSSNSPQQIEVSFHRIWQDVPVLVLVSMLAYFCFLEQLLVSDMGPRALAISLPFACTFGLVASLLASTMVSRDYMWAYACFQFAIVILLAHVFYTIRKLNGVLSVMLSSLAGFAIAMAVNYLLKVFLNWRFRRQIQSIDQTLTEQGQGQHNRRQRQLQEQHQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0527 539 MobiDBLite consensus disorder prediction 117 135 - -
Acco05g0527 539 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 363 IPR013083 -
Acco05g0527 539 MobiDBLite consensus disorder prediction 117 141 - -
Acco05g0527 539 SUPERFAMILY RING/U-box 304 359 - -
Acco05g0527 539 CDD RING_CH-C4HC3_MARCH 308 356 - -
Acco05g0527 539 ProSiteProfiles Zinc finger RING-CH-type profile. 300 362 IPR011016 GO:0008270
Acco05g0527 539 PANTHER OS02G0165000 PROTEIN 75 520 - -
Acco05g0527 539 SMART ringv_2 307 356 IPR011016 GO:0008270
Acco05g0527 539 Pfam RING-variant domain 308 355 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0527 Acco-ChrAcco05 7129848 7136416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0527 291 362 C3H Transcription Factor Family AT2G37950 47.945 2.80e-14 70.1