Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0519 ATGCTTCAAAGCTTGGTCCCTCGATCCTCACTTTCTGAGAATCCGAACGGTAATTCACCATCCTCCATGAAAACTAAGCGCGTGGATCGCGACCTCGATGAAGCCGGCGGTGACGGTGATGATCCTTCCTCGTTCAAGAGACCGAGCTCCGGCAGGAATTTCTCCGGCGAGGCTTCTGTCTCCGGAGAGAAGACTGTGGAGGAAGGGGAGGGGCATGAGGATCAGGAGCCACCGCTAGAAGGCACCGAGTCGACGGGTCTCAGACTTCTCGGACTTTTGCTACAATGCGCCGAGTGCGTCGCTATGGACAACCTGGATGAGGCCAGTAACCTCCTACCGGAGATAGCTGAGCTGTCCTCGCCCTACGGGACGTCACCGGAACGGGTCGGCGCGTACTTTGCACACGCGCTTCAGGCGCGCGTTGTTAGCTCCTGCCTCGGAACTTACTCGCCTCTCACCACGAAATCGCACACTCTCATTCAATCTCAGAGAATCTTCAACGCCTTCCAATCCTACAACTCAGTCTCTCCTCTCGTCAAATTCTCGCACTTCACGGCCAACCAAGCCATCTTCCAGGCCCTCGACGGCGAAGATTGCGTCCACGTCATCGACCTGGACATCATGCAGGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCCCGCTCGAAGAAGATCCGATCAATGAGGATCACAGGGTTCGGATCCTCCGCCGATTTGCTCGAGTCAACCGGACGGAGACTTGCCGACTTCGCGAGTTCACTCGGCTTGCCGTTCGAGTTCCATCCTGTGGAGGGCAAAATCGGGAACATAACCGAACTGAGTCAACTCGGAGTGAGGCCCAACGAGGCCATAGTGGTCCATTGGATGCACCATTGCTTGTACGATATCACGGGAAGCGATTTGGGGACGTTGAGACTGTTGGCGCTGTTGCGGCCGAAGCTGATCACGATGGTGGAACAGGATCTGAGTCACGCCGGGAGCTTTCTCGCGAGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGTGGGGATAGCACAGAGAGGCATACGGTGGAGCAGCAGTTGTTTGGGTGCGAGATAAGGAACATTGTGGCCGTCGGTGGGCCCAAGAGGACCGGCGAAGTGAAGGTCGAGAGATGGGGCGATGAGCTGAGGCGGGTCGGGTTCCGTCCCGCGTCTCTACGGGGCAACCCGGCTGCCCAAGCGGGCCTCCTGTTAGGTATGTACCCTTGGAGAGGGTACACTCTGGTGGAAGAGAATGGATGCCTCAAGTTGGGGTGGAAGGATCTTTGTCTTTTGACTGCCTCTGCGTGGCAGCCGTCGGATTAG 1362 0.5734 MLQSLVPRSSLSENPNGNSPSSMKTKRVDRDLDEAGGDGDDPSSFKRPSSGRNFSGEASVSGEKTVEEGEGHEDQEPPLEGTESTGLRLLGLLLQCAECVAMDNLDEASNLLPEIAELSSPYGTSPERVGAYFAHALQARVVSSCLGTYSPLTTKSHTLIQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSADLLESTGRRLADFASSLGLPFEFHPVEGKIGNITELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLALLRPKLITMVEQDLSHAGSFLARFVEALHYYSALFDALGDGLSGDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRVGFRPASLRGNPAAQAGLLLGMYPWRGYTLVEENGCLKLGWKDLCLLTASAWQPSD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0519 453 MobiDBLite consensus disorder prediction 63 79 - -
Acco05g0519 453 MobiDBLite consensus disorder prediction 24 41 - -
Acco05g0519 453 ProSiteProfiles GRAS family profile. 80 450 IPR005202 -
Acco05g0519 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 445 IPR005202 -
Acco05g0519 453 MobiDBLite consensus disorder prediction 1 23 - -
Acco05g0519 453 Pfam GRAS domain family 91 450 IPR005202 -
Acco05g0519 453 MobiDBLite consensus disorder prediction 46 60 - -
Acco05g0519 453 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0519 Acco-ChrAcco05 6954282 6955643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0519 23 453 GRAS Transcription Factor Family AT5G41920 65.367 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco05g0519 GRAS 3.5e-113 CL0063