Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0515 ATGAATCCAGTGATAGTAACAATGAATGTGAAACCGGCTAGGGTTTTTATCAGCCAGCGAAGAGGCAGAAGAAGGGGCATACTCAGTAAGAAAAGTTCGAAATTCCTAAAAATGGTGAAGTTCTTGAAGCCGAACAAAGCCGTTATTCTCCTTCAGGGACGCTACGCTGGTCGCAAAGCGGTGATCCTACGTAACTTCGATGACGGCACGCGTGACCGCCCCTACGGCCACTGTTTGGTCGCCGGAATCAAGAAGTATCCCAGCAAGGTCATCAAGAAGGATTCGGCCAAGAAGACGGCCAAGAAATCTAGGGTTAAGGCTTTTGTTAAGCTCGTCAACTACCAGCATCTAATGCCTACCCGTTACACCCTCGATGTGGATCTTAAGGAAGTAGCGACCATCGATGCCCTTCAATCTAAGGACAAGAAGGTTACCGCCTTGAAGGAGACCAAGAAGAGATTCGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTGA 519 0.4836 MNPVIVTMNVKPARVFISQRRGRRRGILSKKSSKFLKMVKFLKPNKAVILLQGRYAGRKAVILRNFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVATIDALQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0515 172 Coils Coil 137 157 - -
Acco05g0515 172 ProSitePatterns Ribosomal protein L27e signature. 161 172 IPR018262 GO:0003735|GO:0005840|GO:0006412
Acco05g0515 172 PANTHER 60S RIBOSOMAL PROTEIN L27 38 172 IPR001141 GO:0003735|GO:0005840|GO:0006412
Acco05g0515 172 CDD KOW_RPL27 43 125 IPR041991 -
Acco05g0515 172 Pfam Ribosomal L27e protein family 89 172 IPR001141 GO:0003735|GO:0005840|GO:0006412
Acco05g0515 172 Gene3D - 38 172 IPR038655 -
Acco05g0515 172 FunFam 60S ribosomal protein L27 38 172 - -
Acco05g0515 172 SUPERFAMILY Translation proteins SH3-like domain 39 172 IPR008991 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0515 38 172 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 87.407 1.75e-85 245