Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0489 ATGGGAAATTCCTGTAGGAAACCCATTTTTCACGTCTCTTCCTCCAACATTTCTGGAAAGGGGAAGTCTCAAAGTGAGATAAGTAAGAATTCAAATTCTTCAGATGGAAAAGATGCATCACAAACTTCAGGACAATCTATCGGTGGATCAATCTCGTCAAGTCTTAAATCCTTTAGCTTCAATGATCTAAGGGAAGCCACAAGGAATTTCAGACAAGAAAACCTAATTGGGGAGGGAGGGTTTGGGTTTGTGTACAAGGGATGGATTAATGAGAACTCCTTTGCTCCCACAAGACCGGGCAGTGGGATCATGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCGGAAGTCAATTATTTAGGTCAACTTCACCATGAAAATGTGGTTAAACTTATTGGTTATTGCTCAGACGGCAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAGAGGAAGTTTGGAGAATCATTTATTTAGAAAAGGTGTTCAGCCCATATCATGGGCTGCACGAATAAATATTGCTGTTGGCGTTGCTAGAGGTTTAGCATTTTTGCATACCTTGGATGCAAATGTTATTTACCGTGACTTAAAGGCTTCTAATGTATTACTTGATTCGGACTTCAACCCTAAGCTTTCAGATTTTGGTTTGGCAAGAGATGGTCCTACTGGAGACAACACTCATGTTTCAACCAGAATTATTGGAACACAAGGTTATGCCGCGCCAGAGTATGTTGCTACAGGTCACTTGACACCGAGGAGTGATGTTTACAGCTTTGGTGTTGTCTTGTTAGAGTTACTGACAGGGAGAAGGGTGGTGGAGGCTGAGAAACCTGGAAATGCACGGGAAACTCTGGTTGATTGGGCGATGCCGTTTCTTAAAGAAGGCAAGCGGATTTCAAGGGTGATGGATTTGAGGTTATGTGGTCAGTACTCCAAAAAAGGAGCTCAAGCTGCAGCTGCACTTGCATATCAATGCCTAAATGCAGATCCAAAATACAGACCAACCATGATAAGTGTTCTTGCCAAGTTGGAAGAACTTCACTCCTCAAACTCAACAATCCCAAGAACCCCGCCAAAGTCTGAGTCTAGGAACCATACCAGCAAGCATGCTCGTCATTCCCTAAAGTCAATGAGAAATACATGCTGA 1170 0.4282 MGNSCRKPIFHVSSSNISGKGKSQSEISKNSNSSDGKDASQTSGQSIGGSISSSLKSFSFNDLREATRNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGIMVAIKKLKPESFQGHKEWLAEVNYLGQLHHENVVKLIGYCSDGKNRLLVYEFMQRGSLENHLFRKGVQPISWAARINIAVGVARGLAFLHTLDANVIYRDLKASNVLLDSDFNPKLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEAEKPGNARETLVDWAMPFLKEGKRISRVMDLRLCGQYSKKGAQAAAALAYQCLNADPKYRPTMISVLAKLEELHSSNSTIPRTPPKSESRNHTSKHARHSLKSMRNTC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0489 389 CDD STKc_IRAK 76 354 - -
Acco05g0489 389 Pfam Protein kinase domain 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0489 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Acco05g0489 389 Gene3D Transferase(Phosphotransferase) domain 1 156 376 - -
Acco05g0489 389 MobiDBLite consensus disorder prediction 8 50 - -
Acco05g0489 389 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Acco05g0489 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 364 - -
Acco05g0489 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0489 389 PANTHER OS01G0588500 PROTEIN-RELATED 34 355 - -
Acco05g0489 389 SMART serkin_6 70 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0489 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Acco05g0489 389 Gene3D Phosphorylase Kinase; domain 1 46 155 - -
Acco05g0489 389 MobiDBLite consensus disorder prediction 356 389 - -
Acco05g0489 389 SUPERFAMILY Protein kinase-like (PK-like) 47 352 IPR011009 -
Acco05g0489 389 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0489 Acco-ChrAcco05 6383089 6386628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0489 17 351 Glycoside Hydrolase AT3G07070 46.746 1.14e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco05g0489 Pkinase 8.6e-49 CL0016