Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0486 ATGAGTAAAATGACGGGTGGAGGTGATGCTCCAAAAGTGCCCAAAGGTCGGCAGTCCATGTTTGAAATTGCAGAAGCAAGACGCAGGGGTAATGCTAGAGGAGAAACATATCTGAATAAAGGCCCTTGGACGGTAGCAGAGGATCTAATTTTAGTGGACTTTGTCAAACAATATGGACCAGGAAATTGGAATGCAGTCCAAAAGCACTCAGGCCTTTCCCGCTGTGGGAAAAGCTGCCGCCTACGATGGACAAATCACTTGAGGCCAGACCTGAAACAGTGTCCATTTACTGAAGAGGAGGAGCGTCGAATCATTGAGCTTCATGCTAAGATGGGAAACAGATGGGCTCAAATGGCAACAGAGTTGCCTGGACGGACAGATAATGAAATAAAGAACTACTGGAACACTAGAATCAAGAGAATGCAACGAGCTGGATTACCAATTTATCCTCCTGAAGTATGTGAGCAGGTCCGCAGTCAAAAAAATCAGAATATGGGTACTTTGATGAGTGGAGCCAGCCAGCACTCTGAGATCTCACAAGATGGCAACTTCAATGTCCCAGAACTGGATTTCAAAAATTATGATTTCAGTCGGGCTTATGCATTTGCTCCATCTGGTTTAGATATTCCTGACAGCAGTTTGTTTCACCAACCTGTAGGCCCACCATATAATGATCTTATTTTCTTTGGAAACAGTGCGAAACGGCTTAGGGAGTCAGATATGTTTTATAATAGATTGGACAATAGTAGCAGCTGTATGATCCATGCGAATGCGAATTATCCTGCTGAGCCGCCTCTTTTGTCATCTCCAAGAAATCTGCCCCTTGACCCGAATTATCTGTTTTGCGGTGATAATCTTCATGGCAGCCATGCCGCTTTAAATGGCACTCTCTCTTCTTCGGCGCCCATACCTGAGGCAATGAAACCGGAGCTCCCTTCATTCCAATATTTACAAACTCAACAAGGTAGCTGGGATGCGAATGCATCCCCGCTTCCTTCACTGGAGTCTACTGATACAATGTTTCAGTCCTCTCCAGTTAAACAGTATCAGTCATTTGCTGTTATTCCAGATAATGATGGTTTGTTAGAATCAATAATCTATGATACCAGGCTTCCCGGGGGCTCAAATAACAATGATTCATTGTGGAATACTACTGACCAGTGCATGCTGAATGTGGCTAGAACTGAGACAGAATGGGACCCAAATTCACCCTTTGGTCACTCTTCTGCTTCAGTTCATACAGTTTATACTCCTCCTGTTAGCATCGGCTCAGTTGATGAACCCCACTACATGGAACACACGAGAGCAGATCGTGAAATGAGACAGGAAGCGATTTCACAGGGTCCACCTCACGCTGGTGAAAGCCAAGAAACTTCCAGTGAGATAGACATAACAACATGGCCAGATGCTTTGCTCGACATGAGTTGGTTTGGGAATGAGACCGGTAATGCAGTCAGGTCTCATGAAGATGATGGGCTTGATTGTTATCAGGATTTTCCATGGAAGAAGTCACTGAACGGACATATGAGATCTCATCCTGATAGAGATTGGAGAGGTATGGACCCTTCTTTCACTACTACTGATAATGCAGTAGCTTCTTCAGAAGAGTTAATGGAAGTACAAGCTCAAACCCTTATGAGCATGCATCTCTATGGTAACTCCCACCTTCGAGATCGCCTTCCTTCTCACGACGAGCCTACTCCTGAAGCAGCTGCACTATTACCAGCCAAGAAAAGGAAGAAGAATGTCAGGAAGGACCATGATTGCAAGGAGAAAATAGAGGGTACAGATGGGAATGAAGAATTGGAAGCTCAGAATAACATGTGGGATATGAAAGTGATCAGCATGGTCAAAGAGAAGAAGCTCAATAATGAGAAGTTGAAATTAGGTCCAGGGATATATGATCAAGTCAGAAGGAGAACCGCTGATGATAAGAACTGTGAAGCAAGAAGAAGTGAAACCATCACAAAGCAATGTATGTGA 1983 0.4423 MSKMTGGGDAPKVPKGRQSMFEIAEARRRGNARGETYLNKGPWTVAEDLILVDFVKQYGPGNWNAVQKHSGLSRCGKSCRLRWTNHLRPDLKQCPFTEEEERRIIELHAKMGNRWAQMATELPGRTDNEIKNYWNTRIKRMQRAGLPIYPPEVCEQVRSQKNQNMGTLMSGASQHSEISQDGNFNVPELDFKNYDFSRAYAFAPSGLDIPDSSLFHQPVGPPYNDLIFFGNSAKRLRESDMFYNRLDNSSSCMIHANANYPAEPPLLSSPRNLPLDPNYLFCGDNLHGSHAALNGTLSSSAPIPEAMKPELPSFQYLQTQQGSWDANASPLPSLESTDTMFQSSPVKQYQSFAVIPDNDGLLESIIYDTRLPGGSNNNDSLWNTTDQCMLNVARTETEWDPNSPFGHSSASVHTVYTPPVSIGSVDEPHYMEHTRADREMRQEAISQGPPHAGESQETSSEIDITTWPDALLDMSWFGNETGNAVRSHEDDGLDCYQDFPWKKSLNGHMRSHPDRDWRGMDPSFTTTDNAVASSEELMEVQAQTLMSMHLYGNSHLRDRLPSHDEPTPEAAALLPAKKRKKNVRKDHDCKEKIEGTDGNEELEAQNNMWDMKVISMVKEKKLNNEKLKLGPGIYDQVRRRTADDKNCEARRSETITKQCM 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0486 660 FunFam MYB-related transcription factor 39 92 - -
Acco05g0486 660 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 87 IPR017930 -
Acco05g0486 660 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Acco05g0486 660 MobiDBLite consensus disorder prediction 441 461 - -
Acco05g0486 660 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Acco05g0486 660 Pfam Myb-like DNA-binding domain 95 136 IPR001005 -
Acco05g0486 660 SUPERFAMILY Homeodomain-like 38 134 IPR009057 -
Acco05g0486 660 Gene3D - 94 167 - -
Acco05g0486 660 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Acco05g0486 660 FunFam Transcription factor GAMYB 95 141 - -
Acco05g0486 660 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 32 485 - -
Acco05g0486 660 CDD SANT 42 87 IPR001005 -
Acco05g0486 660 SMART sant 92 140 IPR001005 -
Acco05g0486 660 SMART sant 39 89 IPR001005 -
Acco05g0486 660 Gene3D - 40 92 - -
Acco05g0486 660 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0486 Acco-ChrAcco05 6298645 6307823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0486 38 482 MYB Transcription Factor Family AT5G06100 35.470 8.96e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g0486 Myb_DNA-binding 1.9e-14 CL0123