Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0468 ATGGATCCAAGATATCAACCCGTTGGAATTACCCATTACCCTCAAGAAGAATCTCACCCGAGCCCCTTTACTTCAAAATGGGAGCATGATGTGTTCTTGAGTTTTGCAGGAAAAGATACTCGCTTAAATTTCACTGATCACTTACATGATGCTTTTATTAGAAGGGGCATCAAATGTTTTAGGGATGCTGAAGGAATAGAGAGAGGACAAGTTATAAAACTACAACTCCTTCAAGCCATCAAGGATTCTCTTTGCGCTGTTGTTGTGCTCTCCGAAAATTATGCAAATTCTACATGGTGCTTAGATGAACTTTGGGAGATTCTTGAATCTCGAAGAAAATTTGGTCTCCAAGTTTTTCCTGTCTTCTATGATGTAGATCCATCTGATGTAAGGCACCAAAGAGAGAGTTTTGGGAAAGCTTTAGCCGAACATGAAAAGAGATTCGAAAAAAGCAAGGACAATAAGGTTCAGATATGGAGAGAGGCTTTGTCGGAAGTTAGCCATTTGTCAGGTTGGGACTCTAGGAGTCGGCCTGAAACAGATGTCATCGGAGACATTGTTGAAGCAGTATGGAAAACCGTGTCCTCTAACTTTCCATCTTATGATGATGATTTAGTTGGAGTTGAAGCAAGGATGGTTCAGATAAATTCACTATTAGAGATAAAGGCGCATGACACTTGTTTTGTAGGTATATGGGGTATGGGAGGTATTGGCAAGACAACTCTTGCTAGAGTTGTTTTTGAAAGAATGTCTGCCCAATTTGAAATGTCTTGCTTCCTCCCTAATGTCAAGGAGACTTCAGAAAGACAAGGCCTAAGAGGTGAAGTAGCTCAAATTTTGAAAAATTGTAATTTTCATCCGACAATTGGAATAAATATTTTGATTGAAAGAGCTATGTTGATTGAAAAGACAACATTGGATGGTGAAACCATACTAGAGGTGCATGATTTACTTCAAGAATTAGCTAGGAGTATTATTTTTCAAGAATCTCCTAGTCATATTCATGCACGAAGCAGGTTGTGGAATCTAGAAGACATCAATGAAGTTCTAAAAAATGATCAAGGATCTGAAGCAATACAAGCTATTGTTTTGCCTTATAACCTTGATATAGAAGTAGAAGTACATCGTGAAGCCTTCTCAAAAATGTGTAATCTCAGGTTACTCATCATATCAAGTGAATTGAAAGTTCCCAAAGGCCTCAAATGCTTTCCTAGTGCATTAAAAGTTATTCAATGGAGGCAATGTCCTCTAAAAACTCTTCCGATTGGAACTCGGTTAGATAAACTTGTTGACATTCAAATGCCTTTTAGCAAAATAAAACATTGGAATGGAATGCAGGTGAAACACTTCATACCCCATTGTTTTTTCGGAATGTGGAATATAGTTTCATCACTTGATCATGAGTATCGCCTTCAAACTAATTATGAGAAAAGTGTGCTCCAGTCCATTCAGTCAGGATATGTGCCTGAGGCAGATTTTCTAGCAATAATTCCAAAATCTGAGATGCCTTCATGGTTTCCAAACAGAACCTCTTTTTTAAAAAGATCCTCTTTTTTAAATGGTCCCTTAGAATATGAATTAGTGGTGGACGTGCCTTCATATTTTCGTGCAAGTAAGTGGTGTGGACTTGCCGTATGCCTACAAGTACAAGGCATGCCGTCATCCTGTGCAAAATATGTCATTTCATGGGGTTGTAAAGCTCCTGAAGATTCTCATTTTTCAGAAGAATGGGCAAATGAAATTTCAATTGGCAATGCTTGGGACCCTAACTTTTATGTAATGCTTTTGGATTTCAATGAGAAAACATGTTGGCGACATTTAAGAGAAAATAACAACCGCCTTCACATCAAACTCAGTTTCACTTATGAAGATTCTAGGGCCCTAAATTTGGTATGTAGATGGCGGGTACTATGTAAAGAAGAGATGCAAGAGTGGAGCAATGACACCATTGATAACAAGAAGATAACAGAAGAGCATAGCTCTTATCCTGAGCAGCCACCTCCTTCCCAACAGGGTAGTTCCACTGTAACCAGCAGTGATGGCTCAAGGAGAGGGCAGAACCAAGAAATGAGAAATCCACTGTTAGCTTGGCGGGAGCAGCTCTTCCTTACGGTGATGATAAGCTGTCTGTTTTGGTTCTTGTCAATTGCCCTTATGAAGTAG 2163 0.3911 MDPRYQPVGITHYPQEESHPSPFTSKWEHDVFLSFAGKDTRLNFTDHLHDAFIRRGIKCFRDAEGIERGQVIKLQLLQAIKDSLCAVVVLSENYANSTWCLDELWEILESRRKFGLQVFPVFYDVDPSDVRHQRESFGKALAEHEKRFEKSKDNKVQIWREALSEVSHLSGWDSRSRPETDVIGDIVEAVWKTVSSNFPSYDDDLVGVEARMVQINSLLEIKAHDTCFVGIWGMGGIGKTTLARVVFERMSAQFEMSCFLPNVKETSERQGLRGEVAQILKNCNFHPTIGINILIERAMLIEKTTLDGETILEVHDLLQELARSIIFQESPSHIHARSRLWNLEDINEVLKNDQGSEAIQAIVLPYNLDIEVEVHREAFSKMCNLRLLIISSELKVPKGLKCFPSALKVIQWRQCPLKTLPIGTRLDKLVDIQMPFSKIKHWNGMQVKHFIPHCFFGMWNIVSSLDHEYRLQTNYEKSVLQSIQSGYVPEADFLAIIPKSEMPSWFPNRTSFLKRSSFLNGPLEYELVVDVPSYFRASKWCGLAVCLQVQGMPSSCAKYVISWGCKAPEDSHFSEEWANEISIGNAWDPNFYVMLLDFNEKTCWRHLRENNNRLHIKLSFTYEDSRALNLVCRWRVLCKEEMQEWSNDTIDNKKITEEHSSYPEQPPPSQQGSSTVTSSDGSRRGQNQEMRNPLLAWREQLFLTVMISCLFWFLSIALMK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0468 720 SMART till_3 28 169 IPR000157 GO:0007165
Acco05g0468 720 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 196 - -
Acco05g0468 720 MobiDBLite consensus disorder prediction 1 20 - -
Acco05g0468 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 282 IPR027417 -
Acco05g0468 720 Pfam NB-ARC domain 215 278 IPR002182 GO:0043531
Acco05g0468 720 Gene3D - 194 355 IPR027417 -
Acco05g0468 720 Pfam TIR domain 29 200 IPR000157 GO:0007165
Acco05g0468 720 MobiDBLite consensus disorder prediction 662 688 - -
Acco05g0468 720 Gene3D - 23 193 IPR035897 -
Acco05g0468 720 MobiDBLite consensus disorder prediction 657 688 - -
Acco05g0468 720 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 279 458 IPR044974 GO:0006952
Acco05g0468 720 ProSiteProfiles TIR domain profile. 27 198 IPR000157 GO:0007165
Acco05g0468 720 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 172 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0468 Acco-ChrAcco05 5938775 5943253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0468 254 448 WRKY Transcription Factor Family AT4G12020 29.557 3.92e-22 100