Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0450 ATGAAAGTTTTAGAAAACGGGCTAAGGTCTATTTTTGCTTTATTGTACGATTCTGATGGCCCTTTCCAAGACTGGATTTACGCTGCCAAGATGGCTGCAAGTTTTGCATCTAAATGTTCTCGTGTGGGCCATTCTCTGTTTGGTGGGCTAGGCAATAGTTTATCTGGTTTAGTTACCACATCACAAGAGATCGTAGGCAGCAAATTCTTGTCTCAGCAACAGCAGCAGCGCGGCTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAATTCAGGGGCTAAGAAGGTTATGTGCATTCAACCTCTGAAAGGAAGGAAAGGGGCAAGATTAGGTGACACCATAATTGCATCAGTAAAGGAAGCCCATCCTAATGGAAAAGTTAAGAAAGGGAAAGTTGTGTATGGTGTGGTTGTGCGTGCCGCAATGCAAAAGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTAGTTGACAAGCAAGGGCAGCCGATTGGGACGAGGGTTTTTGGACCAGTCCCACATGAGCTGAGGATGAAGAAACATGTCAAAATACTTACATTAGCAGGGCACATTGCTTAA 597 0.4489 MKVLENGLRSIFALLYDSDGPFQDWIYAAKMAASFASKCSRVGHSLFGGLGNSLSGLVTTSQEIVGSKFLSQQQQQRGFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0450 198 FunFam 50S ribosomal protein HLP, mitochondrial-like 79 198 - -
Acco05g0450 198 Pfam Ribosomal protein L14p/L23e 80 197 IPR000218 GO:0003735|GO:0005840|GO:0006412
Acco05g0450 198 NCBIfam 50S ribosomal protein L14 80 197 IPR005745 GO:0003735|GO:0006412|GO:0015934
Acco05g0450 198 ProSitePatterns Ribosomal protein L14 signature. 136 162 IPR019972 -
Acco05g0450 198 Hamap 50S ribosomal protein L14 [rplN]. 79 198 IPR000218 GO:0003735|GO:0005840|GO:0006412
Acco05g0450 198 SUPERFAMILY Ribosomal protein L14 80 197 IPR036853 GO:0003735|GO:0005840|GO:0006412
Acco05g0450 198 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 80 197 IPR000218 GO:0003735|GO:0005840|GO:0006412
Acco05g0450 198 SMART Ribosomal_L14_2 79 198 IPR000218 GO:0003735|GO:0005840|GO:0006412
Acco05g0450 198 Gene3D Ribosomal protein L14 79 198 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0450 80 181 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 31.481 9.09e-09 50.1