Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0417 ATGGCAGCTTCATGCTTGAACCCACCCAGGTTATCTAGCGCTGAAGATGACCAAGTGATACTCTTTTCAACCTCTAATTCTCCTCAAGACTCAATCTCCATCAGCGCTTCTTCTTCTTCATATCATTCTTCTCCCTCTTCTTCTGGTAATCATAGACTTTCTGTTACCAATCTCTCCTACACTCTTCACCCACATAAATCCATACCCTTTCCATTCTTTCACATGCCTCAAAAGCCTAGGCCTCTCCATATACTTAAGTCAGTCTGTTTTACTGCCAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGAACCGGGAAATCTACGCTTCTTCGTGTCATTGCGGGGCGAGTTAAAGATAGAGACTTTGATCCCGGAAGCATCTCAATCAATGATCATCCAATGACTAGTTCATCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTTTTGACTGTGAAAGAAACTTTAATGTTCAGTGCCAAGTTTAGGCTAAAAGAAATGTCATCAAAGGATCGAGAAGTGACGGTAGAGAGTTTGTTGCAAGAGCTTGGGCTGCTTCATGTTGCAGATAGCTATGTTGGAGATGAAGAGAATAGAGGGATTTCAGGTGGAGAGAGGAAAAGGGTATCTATAGGTTCTGATATGATTCATAATCCTCCTATTTTGGTCTTAGATGAGCCAACCTCAGGTCTAGACAGCTCTTCAGCACTTCAAGTTATAGAGCTTCTTTCATTTATGGTGAAGTCAAGGAAAAGGATAGTGATTCTTTCAATTCACCAACCCAGCTATAGAATATTGCAGTACATTTCTAGGTTCTTGATCCTGTCTCATGGTTCAGTTGTGCACAATGGTAGCTTGAGGACACTTGAGAAAACCATTACCAAGTTGGGATTTCAGATTCCAATGCAGCTCAATGCTTTAGAGTTTGCAATGGAAATTATACACACATTGGAAGATTCAAAAAATTCCACATATGATAGTGACATCACTTGTCCCATAATGCAAGACAAGGAAGAAGAAACTGGCGACGTTCATAATTATGCAAGTGATGATAACAACAAAAGGATTTACAGTGCCTGGTATTTGAACTTCATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAGGCTCTAGTTGGTGGGTTTGGCCTTGGAAGTGTTTACATAAAGGTGAGGAAGGATGAAGGAGGGGTTGCAGAAAGACTTGGCCTTTTTGCATTTAGTCTGAGTTTTCTGCTCTCTTCCACAGTTGAGGCACTTCCGATATACCTTCAAGAGAGATGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCCTACAAAATTTCCTCATACATGGTGGCAAACACACTTGTCTTCCTTCCCTTCTTGTTTGTAGTATCCATACTTTTCTCGGTTCCTGTGTACTGGATCGTAGGTCTCAACCCGTCCCTCTCGGCTTTCGTCTTCTTCATCTTCATCGTCTGGCTCATAGTGCTCATGGCAAGTTCTCTGGTTCTGTTCTTAAGTGCCCTGTCTCCTGATTTCATTTCTGGAAACTCCATGATCTGCACTGTGCTAGGAGCATTCTTCTTATTCTCTGGGTACTTCATTCCAAAAGAGAGCATCCCCAACTACTGGATTTTCATGTACTATGTGTCACTTTATAAGTACCCTCTTGATGCATTGCTCACAAATGAGTATTGGAATGTTAGGACTGAGTGTTTCTCTTCATCAGAAGCAGACTCTAATTGCTTGCTTACTGGTTTTGATGTGCTCAAAAGTAGAGGACTTGATAAAGATACAAGGTGGATGAATGTGAGCATCATGCTTGGCTTCTTTCTGCTATATCGCGTGCTTTGTTGGCTTATTCTCACTAGAAAGGCTTCCAAGGCGACCATATAG 1953 0.4168 MAASCLNPPRLSSAEDDQVILFSTSNSPQDSISISASSSSYHSSPSSSGNHRLSVTNLSYTLHPHKSIPFPFFHMPQKPRPLHILKSVCFTAKSSEIVAVVGPSGTGKSTLLRVIAGRVKDRDFDPGSISINDHPMTSSSQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVTVESLLQELGLLHVADSYVGDEENRGISGGERKRVSIGSDMIHNPPILVLDEPTSGLDSSSALQVIELLSFMVKSRKRIVILSIHQPSYRILQYISRFLILSHGSVVHNGSLRTLEKTITKLGFQIPMQLNALEFAMEIIHTLEDSKNSTYDSDITCPIMQDKEEETGDVHNYASDDNNKRIYSAWYLNFIEILFLCSRFWKVIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERCVLMKEASRGAYKISSYMVANTLVFLPFLFVVSILFSVPVYWIVGLNPSLSAFVFFIFIVWLIVLMASSLVLFLSALSPDFISGNSMICTVLGAFFLFSGYFIPKESIPNYWIFMYYVSLYKYPLDALLTNEYWNVRTECFSSSEADSNCLLTGFDVLKSRGLDKDTRWMNVSIMLGFFLLYRVLCWLILTRKASKATI 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0417 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 311 IPR003439 GO:0005524
Acco05g0417 650 SMART AAA_5 94 296 IPR003593 GO:0016887
Acco05g0417 650 Pfam ABC-2 type transporter 268 335 IPR043926 GO:0140359
Acco05g0417 650 FunFam ABC transporter G family member 23 76 309 - -
Acco05g0417 650 Pfam ABC-2 type transporter 376 584 IPR013525 GO:0016020|GO:0140359
Acco05g0417 650 Gene3D - 54 336 IPR027417 -
Acco05g0417 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 301 IPR027417 -
Acco05g0417 650 Pfam ABC transporter 85 238 IPR003439 GO:0005524
Acco05g0417 650 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524|GO:0016887
Acco05g0417 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0417 Acco-ChrAcco05 5248420 5250583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0417 73 343 Calmodulin-binding Proteins AT2G36910 29.286 3.76e-17 84.0