Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0412 ATGGCTGAACATATTCATGATGGCTATGGAGTCTCCTTTCCCGAACAATATATTAACCCCCAAAGCTTGGCCGCACCGTCCAAAGGAACTGGACTTCTTGTTGGTGGTGACTTTGCTGCACCCCCATCGTTTGTACCACGACCTTGGCCTGGCCAATTCAACATCCCCGGTGGCGGTGGAAAAAGTAACTACAGAGGAAGTGGCAATAACACTGCAAATAGGCGCAGAAAACTGAAACAAATAATAAGGAAACCAAAAGGAAGGCCACCTGGGTCCAAGAATAAGCCAAAACCTGCAATTATGGATGAACAAGCTCTCAAACATGTAATCATTCAGATCCCCGATGGGTGTGACGTGGTGGAGGAGCTGATCAAGTTTGCAGAAATTCATGATGTCGGCCTTACTGTTCTTAGTGGTTCTGGTTCTGTAACTAACGTCACTCTTAGCAACACACTTTCCTATAATGCCCCTTCTTTGACCCTAAATGGAATCTTCACTATGCTCTCTCTTTCTGGTACTTATGTGAAGACCGAAAATTGTTCTTCATCGTCATTACCGCCAAACCCATCTTCATTTCCTGGTGTTGTGTCTTCCCCTGGATTTTCTTGTTTCACTGTGTGTCTTGCAGGAACTAAAGGTGAAATCTTTGGAGGAGTCATAGCTGGAAAAATCATAGCTGCGAGTCTTGTGGTGGTGGTGGTGGCTGCATTGTACAAGAAACCTATGTTTCACAGAGTCCTAAACAATAATGAAACTAATAATAACAGTCTTCTAGTTGATCTCTCTGATGTGGATGAGGCAGTACTAAAGGGTGCCACAAATGATGCTAGTTTGATGGCTTTGCTTGATTCCTTCAACAATGCCATGAGCTCATCAAGCCCCTTGAATAGTCAATCTCCAAATCTTCCACCTACCTAG 918 0.4412 MAEHIHDGYGVSFPEQYINPQSLAAPSKGTGLLVGGDFAAPPSFVPRPWPGQFNIPGGGGKSNYRGSGNNTANRRRKLKQIIRKPKGRPPGSKNKPKPAIMDEQALKHVIIQIPDGCDVVEELIKFAEIHDVGLTVLSGSGSVTNVTLSNTLSYNAPSLTLNGIFTMLSLSGTYVKTENCSSSSLPPNPSSFPGVVSSPGFSCFTVCLAGTKGEIFGGVIAGKIIAASLVVVVVAALYKKPMFHRVLNNNETNNNSLLVDLSDVDEAVLKGATNDASLMALLDSFNNAMSSSSPLNSQSPNLPPT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0412 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 73 254 IPR014476 GO:0003680
Acco05g0412 305 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 237 IPR005175 -
Acco05g0412 305 Gene3D - 106 265 - -
Acco05g0412 305 ProSiteProfiles PPC domain profile profile. 103 260 IPR005175 -
Acco05g0412 305 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 250 - -
Acco05g0412 305 MobiDBLite consensus disorder prediction 55 74 - -
Acco05g0412 305 CDD DUF296 110 225 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0412 Acco-ChrAcco05 5184108 5185025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0412 80 256 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 38.462 2.12e-32 119